Z. japonica Nagirizaki
Zjn_sc00068.1.g03710.1.am.mkhc
Sequence
-
BLAST
| TAIR10 |
AT1G73370.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
595 |
2 |
595 |
0.0 |
158.3 |
67.1 |
82.7 |
| Subject |
942 |
4 |
596 |
|
| Annot |
| Symbols: SUS6, ATSUS6 | sucrose synthase 6 | chr1:27584533-27588326 REVERSE LENGTH=942 |
| NR |
ref|XP_004966535.2| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
595 |
1 |
595 |
0.0 |
143.9 |
93.8 |
97.8 |
| Subject |
856 |
1 |
596 |
|
| Annot |
PREDICTED: sucrose synthase 7 [Setaria italica] |
| IRGSP |
Os04t0309600-01_chr04_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
595 |
1 |
589 |
0.0 |
141.8 |
91.1 |
96.6 |
| Subject |
844 |
1 |
589 |
|
| Annot |
|
| Sbicolor |
Sobic.010G276700.1.p|Chr10|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
595 |
1 |
595 |
0.0 |
156.1 |
93.8 |
97.8 |
| Subject |
929 |
75 |
670 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00068.1.g03710.1.am.mkhc |
length: 595 aa. |
| IPR000368 |
Sucrose synthase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0005985 |
sucrose metabolic process |
|
|
| HMMPfam |
PF00862 |
Sucrose_synth |
1.7e-226 |
9-559 |
| IPR012820 |
Sucrose synthase, plant/cyanobacteria |
| Biological Process |
GO:0005985 |
sucrose metabolic process |
|
|
| Molecular Function |
GO:0016157 |
sucrose synthase activity |
|
|
| HMMPanther |
PTHR12526:SF27 |
SUCROSE |
1.7e-275 |
136-595 |
| HMMTigr |
TIGR02470 |
sucr_synth: |
2.9e-277 |
26-595 |
| no_ID |
|
| Coil |
coil |
coiled-coil |
NA |
42-66 |
| HMMPanther |
PTHR12526 |
GLYCOSYLTRANSFERASE |
1.7e-275 |
136-595 |
| superfamily |
SSF53756 |
UDP-Glycosyltransferase/glycogen |
6.2e-12 |
303-595 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 20 | 16168752 | 16171444 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00068.1 |
maker |
exon |
1588150 |
1588234 |
. |
- |
. |
ID=Zjn_sc00068.1.g03710.1.am.mkhc:exon:9 |
| Zjn_sc00068.1 |
maker |
exon |
1588345 |
1588569 |
. |
- |
. |
ID=Zjn_sc00068.1.g03710.1.am.mkhc:exon:8 |
| Zjn_sc00068.1 |
maker |
exon |
1588674 |
1588957 |
. |
- |
. |
ID=Zjn_sc00068.1.g03710.1.am.mkhc:exon:7 |
| Zjn_sc00068.1 |
maker |
exon |
1589039 |
1589215 |
. |
- |
. |
ID=Zjn_sc00068.1.g03710.1.am.mkhc:exon:6 |
| Zjn_sc00068.1 |
maker |
exon |
1589321 |
1589633 |
. |
- |
. |
ID=Zjn_sc00068.1.g03710.1.am.mkhc:exon:5 |
| Zjn_sc00068.1 |
maker |
exon |
1589727 |
1589845 |
. |
- |
. |
ID=Zjn_sc00068.1.g03710.1.am.mkhc:exon:4 |
| Zjn_sc00068.1 |
maker |
exon |
1589995 |
1590187 |
. |
- |
. |
ID=Zjn_sc00068.1.g03710.1.am.mkhc:exon:3 |
| Zjn_sc00068.1 |
maker |
exon |
1590301 |
1590588 |
. |
- |
. |
ID=Zjn_sc00068.1.g03710.1.am.mkhc:exon:2 |
| Zjn_sc00068.1 |
maker |
exon |
1590705 |
1590842 |
. |
- |
. |
ID=Zjn_sc00068.1.g03710.1.am.mkhc:exon:1 |