Z. japonica Nagirizaki
Zjn_sc00068.1.g02590.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G44190.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 444 68 126 2e-11 86.9 7.4 9.5
Subject 386 145 203
Annot | Symbols: GLK2, ATGLK2, GPRI2 | GOLDEN2-like 2 | chr5:17798435-17800647 FORWARD LENGTH=386
NR ref|XP_004967279.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 444 1 406 1e-63 150.7 43 55.2
Subject 669 90 534
Annot PREDICTED: uncharacterized protein LOC101775816 [Setaria italica]
IRGSP Os02t0796500-03_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 444 37 126 4e-12 155 7.9 12.2
Subject 688 181 270
Annot
Sbicolor Sobic.010G257000.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 444 1 91 3e-15 110.6 10.4 14.2
Subject 491 92 206
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00068.1.g02590.1.sm.mk length: 444 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 3e-09 72-122
IPR006447 Myb domain, plants
HMMTigr TIGR01557 myb_SHAQKYF: 5.7e-19 72-124
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 2.5e-18 68-126
superfamily SSF46689 Homeodomain-like 1.1e-15 66-129
IPR017930 Myb domain
ProfileScan PS51294 HTH_MYB 14.955 67-126
no_ID  
HMMPanther PTHR31312 FAMILY 5.8e-12 61-137
HMMPanther PTHR31312:SF0 SUBFAMILY 5.8e-12 61-137
Seg seg seg NA 259-269
Pseudomolecule
Chromosome Start End Strand
201572061415722575-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00068.1 maker_non_over exon 1140012 1140989 . - . ID=Zjn_sc00068.1.g02590.1.sm.mk:exon:3
Zjn_sc00068.1 maker_non_over exon 1141517 1141593 . - . ID=Zjn_sc00068.1.g02590.1.sm.mk:exon:2
Zjn_sc00068.1 maker_non_over exon 1141694 1141973 . - . ID=Zjn_sc00068.1.g02590.1.sm.mk:exon:1

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