Z. japonica Nagirizaki
Zjn_sc00068.1.g02500.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G75340.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 277 17 225 2e-26 143.7 32.5 43.7
Subject 398 158 394
Annot | Symbols: | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr1:28269153-28271873 REVERSE LENGTH=398
NR ref|XP_004966351.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 277 15 227 9e-81 142.6 58.8 66.1
Subject 395 150 389
Annot PREDICTED: zinc finger CCCH domain-containing protein 46 [Setaria italica]
IRGSP Os06t0704300-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 277 16 231 1e-69 140.8 50.9 61.4
Subject 390 157 388
Annot
Sbicolor Sobic.010G254900.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 277 15 227 5e-78 148.7 56.7 63.9
Subject 412 163 406
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00068.1.g02500.1.sm.mkhc length: 277 aa.
no_ID  
method AccNumber shortName E-value location
Seg seg seg NA 70-87
228-237
244-253
Pseudomolecule
Chromosome Start End Strand
201568202215686431+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00068.1 maker exon 1101420 1101463 . + . ID=Zjn_sc00068.1.g02500.1.sm.mkhc:exon:1
Zjn_sc00068.1 maker exon 1102282 1102375 . + . ID=Zjn_sc00068.1.g02500.1.sm.mkhc:exon:2
Zjn_sc00068.1 maker exon 1102764 1102987 . + . ID=Zjn_sc00068.1.g02500.1.sm.mkhc:exon:3
Zjn_sc00068.1 maker exon 1103179 1103291 . + . ID=Zjn_sc00068.1.g02500.1.sm.mkhc:exon:4
Zjn_sc00068.1 maker exon 1103980 1104094 . + . ID=Zjn_sc00068.1.g02500.1.sm.mkhc:exon:5
Zjn_sc00068.1 maker exon 1104496 1104559 . + . ID=Zjn_sc00068.1.g02500.1.sm.mkhc:exon:6
Zjn_sc00068.1 maker exon 1104861 1104886 . + . ID=Zjn_sc00068.1.g02500.1.sm.mkhc:exon:7
Zjn_sc00068.1 maker exon 1105676 1105829 . + . ID=Zjn_sc00068.1.g02500.1.sm.mkhc:exon:8

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