Z. japonica Nagirizaki
Zjn_sc00068.1.g02120.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G51600.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 266 128 246 8e-40 113.5 32 37.2
Subject 302 82 209
Annot | Symbols: ZML2, TIFY2A, GATA28 | ZIM-LIKE 2 | chr1:19133176-19135252 FORWARD LENGTH=302
NR ref|XP_010227411.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 266 1 258 1e-80 130.5 73.7 81.2
Subject 347 1 261
Annot PREDICTED: GATA transcription factor 24-like [Brachypodium distachyon]
IRGSP Os06t0698900-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 266 87 258 2e-75 109.8 52.3 57.5
Subject 292 42 208
Annot
Sbicolor Sobic.010G249200.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 266 1 258 1e-77 132.3 72.2 82
Subject 352 1 261
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00068.1.g02120.1.sm.mkhc length: 266 aa.
IPR010399 Tify
method AccNumber shortName E-value location
HMMPfam PF06200 tify 1.6e-13 124-157
HMMSmart SM00979 no description 9.2e-13 123-158
ProfileScan PS51320 TIFY 15.123 123-158
IPR010402 CCT domain
Molecular Function GO:0005515 protein binding    
HMMPfam PF06203 CCT 1.2e-18 184-227
ProfileScan PS51017 CCT 13.334 184-226
no_ID  
Seg seg seg NA 41-51
57-91
99-106
Pseudomolecule
Chromosome Start End Strand
201551395515517444-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00068.1 maker exon 933353 933994 . - . ID=Zjn_sc00068.1.g02120.1.sm.mkhc:exon:5
Zjn_sc00068.1 maker exon 935302 935430 . - . ID=Zjn_sc00068.1.g02120.1.sm.mkhc:exon:4
Zjn_sc00068.1 maker exon 935985 936097 . - . ID=Zjn_sc00068.1.g02120.1.sm.mkhc:exon:3
Zjn_sc00068.1 maker exon 936206 936292 . - . ID=Zjn_sc00068.1.g02120.1.sm.mkhc:exon:2
Zjn_sc00068.1 maker exon 936399 936842 . - . ID=Zjn_sc00068.1.g02120.1.sm.mkhc:exon:1

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