Z. japonica Nagirizaki
Zjn_sc00068.1.g01620.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G67230.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 478 42 474 e-126 102.9 47.7 62.8
Subject 492 31 471
Annot | Symbols: IRX14-L, I14H | Nucleotide-diphospho-sugar transferases superfamily protein | chr5:26822506-26824181 FORWARD LENGTH=492
NR emb|CAI93190.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 478 1 478 0.0 111.1 85.6 91.4
Subject 531 1 514
Annot glycosyltransferase [Saccharum officinarum]
IRGSP Os06t0687900-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 478 370 467 1e-46 25.1 17.6 20.1
Subject 120 1 98
Annot
Sbicolor Sobic.010G238800.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 478 1 478 0.0 110.3 85.8 91.2
Subject 527 1 510
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00068.1.g01620.1.sm.mkhc length: 478 aa.
IPR005027 Glycosyl transferase, family 43
method AccNumber shortName E-value location
Molecular Function GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity    
Cellular Component GO:0016020 membrane    
HMMPanther PTHR10896 GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 2.7e-90 26-443
HMMPfam PF03360 Glyco_transf_43 4.8e-26 218-258
262-420
no_ID  
Gene3D G3DSA:3.90.550.10 no description 4.5e-27 197-261
263-435
HMMPanther PTHR10896:SF1 BETA-1,3-GLUCURONYLTRANSFERASE 2.7e-90 26-443
Seg seg seg NA 13-41
61-131
superfamily SSF53448 Nucleotide-diphospho-sugar 1.1e-56 196-439
Pseudomolecule
Chromosome Start End Strand
201528930115291814+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00068.1 maker exon 708699 709482 . + . ID=Zjn_sc00068.1.g01620.1.sm.mkhc:exon:1
Zjn_sc00068.1 maker exon 709740 710244 . + . ID=Zjn_sc00068.1.g01620.1.sm.mkhc:exon:2
Zjn_sc00068.1 maker exon 710746 711212 . + . ID=Zjn_sc00068.1.g01620.1.sm.mkhc:exon:3

Top