Z. japonica Nagirizaki
Zjn_sc00067.1.g03170.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G59760.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 362 31 307 1e-72 118.8 41.2 55.2
Subject 430 112 416
Annot | Symbols: OASC, ATCS-C | O-acetylserine (thiol) lyase isoform C | chr3:22072668-22075345 REVERSE LENGTH=430
NR ref|XP_004964842.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 362 1 308 e-142 95.6 77.1 81.8
Subject 346 1 335
Annot PREDICTED: cysteine synthase-like [Setaria italica]
IRGSP Os06t0149700-00_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 362 4 309 e-129 93.6 64.4 74.3
Subject 339 2 329
Annot
Sbicolor Sobic.010G039300.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 362 1 308 e-148 95.6 76 80.7
Subject 346 1 335
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00067.1.g03170.1.sm.mkhc length: 362 aa.
IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily
method AccNumber shortName E-value location
HMMPfam PF00291 PALP 9.2e-32 37-115
134-294
superfamily SSF53686 Tryptophan 5.5e-77 30-309
no_ID  
Gene3D G3DSA:3.40.50.1100 no description 1.4e-81 69-118
129-309
HMMPanther PTHR10314 SER/THR 3.2e-147 1-309
HMMPanther PTHR10314:SF8 CYSTEINE 3.2e-147 1-309
Seg seg seg NA 17-23
176-189
241-250
350-357
Pseudomolecule
Chromosome Start End Strand
1917016691705272+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00067.1 maker exon 1472325 1473070 . + . ID=Zjn_sc00067.1.g03170.1.sm.mkhc:exon:1
Zjn_sc00067.1 maker exon 1473150 1473277 . + . ID=Zjn_sc00067.1.g03170.1.sm.mkhc:exon:2
Zjn_sc00067.1 maker exon 1473659 1473771 . + . ID=Zjn_sc00067.1.g03170.1.sm.mkhc:exon:3
Zjn_sc00067.1 maker exon 1473997 1474122 . + . ID=Zjn_sc00067.1.g03170.1.sm.mkhc:exon:4
Zjn_sc00067.1 maker exon 1474474 1474632 . + . ID=Zjn_sc00067.1.g03170.1.sm.mkhc:exon:5
Zjn_sc00067.1 maker exon 1475005 1475198 . + . ID=Zjn_sc00067.1.g03170.1.sm.mkhc:exon:6
Zjn_sc00067.1 maker exon 1475291 1475383 . + . ID=Zjn_sc00067.1.g03170.1.sm.mkhc:exon:7
Zjn_sc00067.1 maker exon 1475767 1475928 . + . ID=Zjn_sc00067.1.g03170.1.sm.mkhc:exon:8

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