Z. japonica Nagirizaki
Zjn_sc00067.1.g02420.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G45300.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 280 117 280 5e-78 185.7 47.5 51.8
Subject 520 357 520
Annot | Symbols: | RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta | chr2:18677518-18679868 FORWARD LENGTH=520
NR gb|ADB85252.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 280 117 280 2e-90 139.6 58.2 58.6
Subject 391 228 391
Annot 5-enolpyruvyl shikimate 3-phosphate synthase [Zoysia japonica]
IRGSP Os06t0133900-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 280 117 280 2e-90 115 55.4 58.6
Subject 322 159 322
Annot
Sbicolor Sobic.010G023800.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 280 117 280 2e-92 180.7 56.8 58.6
Subject 506 343 506
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00067.1.g02420.1.sm.mkhc length: 280 aa.
IPR001986 Enolpyruvate transferase domain
method AccNumber shortName E-value location
Molecular Function GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups    
Gene3D G3DSA:3.65.10.10 no description 1.5e-55 1-116
117-277
HMMPfam PF00275 EPSP_synthase 5.5e-52 1-111
118-274
IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta
Molecular Function GO:0003824 catalytic activity    
superfamily SSF55205 EPT/RTPC-like 3.4e-15 118-277
1-115
IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site
PatternScan PS00104 EPSP_SYNTHASE_1 NA 42-56
PatternScan PS00885 EPSP_SYNTHASE_2 NA 192-210
no_ID  
HMMPanther PTHR21090 AROM/DEHYDROQUINATE 5.4e-155 1-278
HMMPanther PTHR21090:SF3 3-PHOSPHOSHIKIMATE 5.4e-155 1-278
Seg seg seg NA 55-66
105-121
Pseudomolecule
Chromosome Start End Strand
1913993341402882+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00067.1 maker exon 1169990 1170090 . + . ID=Zjn_sc00067.1.g02420.1.sm.mkhc:exon:1
Zjn_sc00067.1 maker exon 1170517 1170761 . + . ID=Zjn_sc00067.1.g02420.1.sm.mkhc:exon:2
Zjn_sc00067.1 maker exon 1170876 1171029 . + . ID=Zjn_sc00067.1.g02420.1.sm.mkhc:exon:3
Zjn_sc00067.1 maker exon 1172404 1172614 . + . ID=Zjn_sc00067.1.g02420.1.sm.mkhc:exon:4
Zjn_sc00067.1 maker exon 1172702 1172763 . + . ID=Zjn_sc00067.1.g02420.1.sm.mkhc:exon:5
Zjn_sc00067.1 maker exon 1172873 1173538 . + . ID=Zjn_sc00067.1.g02420.1.sm.mkhc:exon:6

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