Z. japonica Nagirizaki
Zjn_sc00067.1.g02410.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G45290.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 633 1 633 0.0 117.1 85.3 92.4
Subject 741 108 740
Annot | Symbols: | Transketolase | chr2:18672737-18675589 FORWARD LENGTH=741
NR ref|XP_002437762.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 633 1 633 0.0 100 95.1 96.7
Subject 633 1 633
Annot hypothetical protein SORBIDRAFT_10g002220 [Sorghum bicolor] gi|241915985|gb|EER89129.1| hypothetical protein SORBIDRAFT_10g002220 [Sorghum bicolor]
IRGSP Os06t0133800-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 633 1 633 0.0 107.1 91.6 95.9
Subject 678 46 678
Annot
Sbicolor Sobic.010G023700.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 633 1 633 0.0 116.9 95.1 96.7
Subject 740 108 740
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00067.1.g02410.1.sm.mkhc length: 633 aa.
IPR005474 Transketolase, N-terminal
method AccNumber shortName E-value location
HMMPfam PF00456 Transketolase_N 1e-134 1-307
IPR005475 Transketolase-like, pyrimidine-binding domain
HMMPfam PF02779 Transket_pyr 3.2e-44 325-495
HMMSmart SM00861 Transketolase, 6.2e-60 324-496
IPR005476 Transketolase, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF02780 Transketolase_C 1.6e-08 523-626
IPR005478 Transketolase, bacterial-like
Molecular Function GO:0004802 transketolase activity    
HMMTigr TIGR00232 tktlase_bact: 1e-267 1-632
IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF52922 TK 6.9e-45 498-633
IPR015941 Transketolase-like, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.920 no description 4.5e-42 507-632
no_ID  
Gene3D G3DSA:3.40.50.970 no description 2e-71 1-293
303-501
HMMPanther PTHR11624 DEHYDROGENASE 0 1-633
HMMPanther PTHR11624:SF1 TRANSKETOLASE 0 1-633
superfamily SSF52518 Thiamin 4.2e-68 1-307
306-497
Pseudomolecule
Chromosome Start End Strand
1913902551393406-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00067.1 maker exon 1160911 1162210 . - . ID=Zjn_sc00067.1.g02410.1.sm.mkhc:exon:7
Zjn_sc00067.1 maker exon 1162294 1162447 . - . ID=Zjn_sc00067.1.g02410.1.sm.mkhc:exon:6
Zjn_sc00067.1 maker exon 1162527 1162675 . - . ID=Zjn_sc00067.1.g02410.1.sm.mkhc:exon:5
Zjn_sc00067.1 maker exon 1162758 1163040 . - . ID=Zjn_sc00067.1.g02410.1.sm.mkhc:exon:4
Zjn_sc00067.1 maker exon 1163124 1163229 . - . ID=Zjn_sc00067.1.g02410.1.sm.mkhc:exon:3
Zjn_sc00067.1 maker exon 1163329 1163419 . - . ID=Zjn_sc00067.1.g02410.1.sm.mkhc:exon:2
Zjn_sc00067.1 maker exon 1163830 1164062 . - . ID=Zjn_sc00067.1.g02410.1.sm.mkhc:exon:1

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