Z. japonica Nagirizaki
Zjn_sc00067.1.g02230.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G34710.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 703 1 674 0.0 101.1 63.2 77.1
Subject 711 1 695
Annot | Symbols: ADC2, SPE2, ATADC2 | arginine decarboxylase 2 | chr4:16560315-16562450 REVERSE LENGTH=711
NR ref|XP_004964433.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 703 1 665 0.0 100.1 84.8 88.6
Subject 704 1 666
Annot PREDICTED: arginine decarboxylase 1 [Setaria italica]
IRGSP Os06t0131300-00_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 703 1 703 0.0 99.9 89.2 92.9
Subject 702 1 702
Annot
Sbicolor Sobic.010G021800.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 703 1 703 0.0 99.7 85.5 89.9
Subject 701 1 701
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00067.1.g02230.1.sm.mk length: 703 aa.
IPR000183 Ornithine/DAP/Arg decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
FPrintScan PR01179 ODADCRBXLASE 1.8e-22 148-166
172-184
292-305
387-406
577-590
IPR002985 Arginine decarboxylase
Biological Process GO:0006527 arginine catabolic process    
Biological Process GO:0008295 spermidine biosynthetic process    
Molecular Function GO:0008792 arginine decarboxylase activity    
FPrintScan PR01180 ARGDCRBXLASE 1.4e-98 116-131
140-154
199-214
225-246
249-271
377-394
500-521
525-550
577-598
HMMPIR PIRSF001336 Arginine 0 46-670
HMMPanther PTHR11482:SF3 ARGININE 0 1-639
HMMTigr TIGR01273 speA: 2.2e-218 46-643
IPR009006 Alanine racemase/group IV decarboxylase, C-terminal
Molecular Function GO:0003824 catalytic activity    
Gene3D G3DSA:2.40.37.10 no description 4.7e-10 490-601
IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal
Molecular Function GO:0003824 catalytic activity    
HMMPfam PF00278 Orn_DAP_Arg_deC 4.8e-28 495-598
IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal
Molecular Function GO:0003824 catalytic activity    
HMMPfam PF02784 Orn_Arg_deC_N 1.3e-58 128-398
IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site
PatternScan PS00878 ODR_DC_2_1 NA 148-166
no_ID  
Gene3D G3DSA:3.20.20.10 no description 6.1e-50 118-377
HMMPanther PTHR11482 ARGININE/DIAMINOPIMELATE/ORNITHINE 0 1-639
Seg seg seg NA 3-17
22-36
91-115
661-686
superfamily SSF51419 PLP-binding 2.8e-70 116-400
Pseudomolecule
Chromosome Start End Strand
1913101121312223-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00067.1 maker_non_over exon 1080768 1082879 . - . ID=Zjn_sc00067.1.g02230.1.sm.mk:exon:1

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