Z. japonica Nagirizaki
Zjn_sc00067.1.g00110.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G46400.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 226 44 110 1e-16 130.5 15.9 19.9
Subject 295 104 169
Annot | Symbols: WRKY46, ATWRKY46 | WRKY DNA-binding protein 46 | chr2:19043676-19044754 REVERSE LENGTH=295
NR ref|XP_004977387.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 226 1 226 3e-82 98.7 74.3 82.3
Subject 223 1 223
Annot PREDICTED: probable WRKY transcription factor 48 [Setaria italica]
IRGSP Os11t0116900-01_chr11_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 226 1 226 1e-81 99.1 70.8 83.6
Subject 224 1 224
Annot
Sbicolor Sobic.008G029400.1.p|Chr08|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 226 1 226 2e-74 99.6 69.9 77.4
Subject 225 1 225
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00067.1.g00110.1.sm.mkhc length: 226 aa.
IPR003657 DNA-binding WRKY
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
Gene3D G3DSA:2.20.25.80 no description 1.3e-21 33-105
HMMPfam PF03106 WRKY 1.7e-19 44-105
HMMSmart SM00774 DNA 2.9e-32 43-106
ProfileScan PS50811 WRKY 15.950 38-107
superfamily SSF118290 WRKY 6.8e-22 34-108
no_ID  
Seg seg seg NA 124-137
195-204
Pseudomolecule
Chromosome Start End Strand
97830780844+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00067.1 maker exon 78307 78454 . + . ID=Zjn_sc00067.1.g00110.1.sm.mkhc:exon:1
Zjn_sc00067.1 maker exon 78534 78638 . + . ID=Zjn_sc00067.1.g00110.1.sm.mkhc:exon:2
Zjn_sc00067.1 maker exon 79943 80844 . + . ID=Zjn_sc00067.1.g00110.1.sm.mkhc:exon:3

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