Z. japonica Nagirizaki
Zjn_sc00066.1.g02950.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G37740.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 395 18 197 3e-34 135.4 20.3 27.1
Subject 535 164 317
Annot | Symbols: AtGRF2, GRF2 | growth-regulating factor 2 | chr4:17725533-17727609 REVERSE LENGTH=535
NR ref|XP_012701613.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 395 1 380 e-151 96.2 76.2 81.5
Subject 380 1 380
Annot PREDICTED: growth-regulating factor 1-like isoform X2 [Setaria italica]
IRGSP Os02t0776900-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 395 1 378 e-128 100.5 67.6 77.5
Subject 397 1 395
Annot
Sbicolor Sobic.004G317000.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 395 1 380 e-142 100.3 72.7 80.8
Subject 396 1 393
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00066.1.g02950.1.sm.mkhc length: 395 aa.
IPR014977 WRC
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF08879 WRC 2e-22 89-132
IPR014978 Glutamine-Leucine-Glutamine, QLQ
Molecular Function GO:0005524 ATP binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides    
HMMPfam PF08880 QLQ 4.4e-16 18-52
HMMSmart SM00951 no description 3.7e-11 17-53
no_ID  
HMMPanther PTHR31602 FAMILY 2.9e-87 1-382
Seg seg seg NA 1-16
136-177
279-290
Pseudomolecule
Chromosome Start End Strand
81973040519731819-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00066.1 maker exon 1400813 1401177 . + . ID=Zjn_sc00066.1.g02950.1.sm.mkhc:exon:1
Zjn_sc00066.1 maker exon 1401257 1402227 . + . ID=Zjn_sc00066.1.g02950.1.sm.mkhc:exon:2

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