Z. japonica Nagirizaki
Zjn_sc00066.1.g00540.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G02260.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 668 143 666 0.0 75.1 49.6 58.8
Subject 502 1 502
Annot | Symbols: | Divalent ion symporter | chr1:440757-442459 REVERSE LENGTH=502
NR ref|NP_001148124.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 668 143 668 0.0 78.9 66.3 70.7
Subject 527 1 527
Annot arsenite transport subunit B [Zea mays] gi|195615976|gb|ACG29818.1| arsenite transport subunit B [Zea mays] gi|219886817|gb|ACL53783.1| unknown [Zea mays] gi|413924016|gb|AFW63948.1| arsenite transport subunit B [Zea mays]
IRGSP Os02t0822100-01_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 668 143 667 0.0 79.3 65.9 68.9
Subject 530 1 529
Annot
Sbicolor Sobic.004G350000.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 668 143 668 0.0 74 64.2 68.1
Subject 494 1 494
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00066.1.g00540.1.am.mk length: 668 aa.
IPR004680 Citrate transporter-like domain
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF03600 CitMHS 9.4e-95 158-614
no_ID  
HMMPanther PTHR10283 SOLUTE 6e-286 157-665
HMMPanther PTHR10283:SF40 ARSENITE 6e-286 157-665
Seg seg seg NA 85-94
125-140
179-193
356-371
438-445
585-602
654-665
Pseudomolecule
Chromosome Start End Strand
82084393820847384+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00066.1 maker_non_over exon 285248 285516 . - . ID=Zjn_sc00066.1.g00540.1.am.mk:exon:5
Zjn_sc00066.1 maker_non_over exon 285605 285794 . - . ID=Zjn_sc00066.1.g00540.1.am.mk:exon:4
Zjn_sc00066.1 maker_non_over exon 285913 287053 . - . ID=Zjn_sc00066.1.g00540.1.am.mk:exon:3
Zjn_sc00066.1 maker_non_over exon 287307 287626 . - . ID=Zjn_sc00066.1.g00540.1.am.mk:exon:2
Zjn_sc00066.1 maker_non_over exon 288608 288694 . - . ID=Zjn_sc00066.1.g00540.1.am.mk:exon:1

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