Z. japonica Nagirizaki
Zjn_sc00065.1.g00500.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G17920.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 765 1 765 0.0 100 87.5 92.9
Subject 765 1 765
Annot | Symbols: ATCIMS | Cobalamin-independent synthase family protein | chr5:5935771-5939195 FORWARD LENGTH=765
NR ref|XP_006650367.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 765 1 765 0.0 100.1 95 97.5
Subject 766 1 766
Annot PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 1-like [Oryza brachyantha]
IRGSP Os12t0624000-02_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 765 1 765 0.0 100.1 94 97.4
Subject 766 1 766
Annot
Sbicolor Sobic.001G148900.2.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 765 1 765 0.0 100 96.6 99
Subject 765 1 765
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00065.1.g00500.1.sm.mkhc length: 765 aa.
IPR002629 Methionine synthase, vitamin-B12 independent
method AccNumber shortName E-value location
Molecular Function GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity    
Biological Process GO:0009086 methionine biosynthetic process    
HMMPfam PF01717 Meth_synt_2 9.6e-150 432-755
IPR006276 Cobalamin-independent methionine synthase
Molecular Function GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity    
Biological Process GO:0009086 methionine biosynthetic process    
HAMAP MF_00172 Meth_synth 34.527 1-760
HMMPIR PIRSF000382 Cobalamin-independent 0 1-765
HMMTigr TIGR01371 met_syn_B12ind: 0 6-760
IPR013215 Cobalamin (vitamin B12)-independent methionine synthase MetE, N-terminal
Molecular Function GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity    
Molecular Function GO:0008270 zinc ion binding    
Biological Process GO:0008652 cellular amino acid biosynthetic process    
HMMPfam PF08267 Meth_synt_1 3.4e-115 3-317
no_ID  
Gene3D G3DSA:3.20.20.210 no description 1.8e-125 2-390
393-762
HMMPanther PTHR30519 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE 0 1-765
Seg seg seg NA 174-185
300-315
375-392
superfamily SSF51726 UROD/MetE-like 1.8e-121 396-760
1-395
Pseudomolecule
Chromosome Start End Strand
151673775172328-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00065.1 maker exon 314671 315325 . - . ID=Zjn_sc00065.1.g00500.1.sm.mkhc:exon:14
Zjn_sc00065.1 maker exon 315414 315542 . - . ID=Zjn_sc00065.1.g00500.1.sm.mkhc:exon:13
Zjn_sc00065.1 maker exon 315631 315703 . - . ID=Zjn_sc00065.1.g00500.1.sm.mkhc:exon:12
Zjn_sc00065.1 maker exon 315803 316053 . - . ID=Zjn_sc00065.1.g00500.1.sm.mkhc:exon:11
Zjn_sc00065.1 maker exon 316239 316344 . - . ID=Zjn_sc00065.1.g00500.1.sm.mkhc:exon:10
Zjn_sc00065.1 maker exon 316418 316584 . - . ID=Zjn_sc00065.1.g00500.1.sm.mkhc:exon:9
Zjn_sc00065.1 maker exon 316670 316750 . - . ID=Zjn_sc00065.1.g00500.1.sm.mkhc:exon:8
Zjn_sc00065.1 maker exon 316866 317029 . - . ID=Zjn_sc00065.1.g00500.1.sm.mkhc:exon:7
Zjn_sc00065.1 maker exon 317131 317330 . - . ID=Zjn_sc00065.1.g00500.1.sm.mkhc:exon:6
Zjn_sc00065.1 maker exon 317430 317621 . - . ID=Zjn_sc00065.1.g00500.1.sm.mkhc:exon:5
Zjn_sc00065.1 maker exon 317700 317827 . - . ID=Zjn_sc00065.1.g00500.1.sm.mkhc:exon:4
Zjn_sc00065.1 maker exon 318008 318095 . - . ID=Zjn_sc00065.1.g00500.1.sm.mkhc:exon:3
Zjn_sc00065.1 maker exon 318188 318541 . - . ID=Zjn_sc00065.1.g00500.1.sm.mkhc:exon:2
Zjn_sc00065.1 maker exon 319537 319622 . - . ID=Zjn_sc00065.1.g00500.1.sm.mkhc:exon:1

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