Z. japonica Nagirizaki
Zjn_sc00065.1.g00070.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G45110.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 588 30 554 e-131 99.7 43.4 59.9
Subject 586 37 558
Annot | Symbols: NPR3, ATNPR3 | NPR1-like protein 3 | chr5:18229319-18231334 FORWARD LENGTH=586
NR ref|XP_002464110.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 588 24 586 0.0 101.7 78.4 86.2
Subject 598 35 597
Annot hypothetical protein SORBIDRAFT_01g012450 [Sorghum bicolor] gi|241917964|gb|EER91108.1| hypothetical protein SORBIDRAFT_01g012450 [Sorghum bicolor]
IRGSP Os03t0667100-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 588 27 586 0.0 100.2 73 81.3
Subject 589 24 588
Annot
Sbicolor Sobic.001G143000.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 588 24 586 0.0 101.7 78.4 86.2
Subject 598 35 597
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00065.1.g00070.1.am.mkhc length: 588 aa.
IPR000210 BTB/POZ-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
ProfileScan PS50097 BTB 12.578 53-135
IPR002110 Ankyrin repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00248 ankyrin 0.0091 290-320
324-353
ProfileScan PS50088 ANK_REPEAT 10.686 324-356
IPR011333 BTB/POZ fold
Gene3D G3DSA:3.30.710.10 no description 9.8e-08 51-181
superfamily SSF54695 POZ 1.8e-09 27-185
IPR020683 Ankyrin repeat-containing domain
Gene3D G3DSA:1.25.40.20 no description 1.8e-15 269-381
HMMPfam PF12796 Ank_2 6.9e-11 269-353
ProfileScan PS50297 ANK_REP_REGION 17.529 290-362
superfamily SSF48403 Ankyrin 2.3e-15 266-379
IPR021094 NPR1/NIM1-like, C-terminal
HMMPfam PF12313 NPR1_like_C 1.7e-80 366-568
IPR024228 Domain of unknown function DUF3420
HMMPfam PF11900 DUF3420 1.4e-10 221-267
no_ID  
Seg seg seg NA 3-27
81-95
267-283
555-569
Pseudomolecule
Chromosome Start End Strand
148983754901884+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00065.1 maker exon 45669 46418 . + . ID=Zjn_sc00065.1.g00070.1.am.mkhc:exon:1
Zjn_sc00065.1 maker exon 46617 47382 . + . ID=Zjn_sc00065.1.g00070.1.am.mkhc:exon:2
Zjn_sc00065.1 maker exon 48060 48245 . + . ID=Zjn_sc00065.1.g00070.1.am.mkhc:exon:3
Zjn_sc00065.1 maker exon 48402 49178 . + . ID=Zjn_sc00065.1.g00070.1.am.mkhc:exon:4

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