Z. japonica Nagirizaki
Zjn_sc00065.1.g00040.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G45110.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 570 29 537 e-102 102.8 38.4 55.3
Subject 586 37 560
Annot | Symbols: NPR3, ATNPR3 | NPR1-like protein 3 | chr5:18229319-18231334 FORWARD LENGTH=586
NR ref|XP_002464110.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 570 21 564 0.0 104.9 66 76.7
Subject 598 34 595
Annot hypothetical protein SORBIDRAFT_01g012450 [Sorghum bicolor] gi|241917964|gb|EER91108.1| hypothetical protein SORBIDRAFT_01g012450 [Sorghum bicolor]
IRGSP Os03t0667100-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 570 27 556 0.0 103.3 62.6 73.2
Subject 589 25 577
Annot
Sbicolor Sobic.001G143000.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 570 21 564 0.0 104.9 66 76.7
Subject 598 34 595
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00065.1.g00040.1.sm.mkhc length: 570 aa.
IPR000210 BTB/POZ-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
ProfileScan PS50097 BTB 14.563 52-132
IPR002110 Ankyrin repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00248 ankyrin 0.032 288-318
322-351
ProfileScan PS50088 ANK_REPEAT 9.938 322-349
IPR011333 BTB/POZ fold
Gene3D G3DSA:3.30.710.10 no description 2.4e-10 184-213
superfamily SSF54695 POZ 2.8e-11 26-182
IPR013069 BTB/POZ
Molecular Function GO:0005515 protein binding    
HMMPfam PF00651 BTB 1.5e-06 53-132
IPR020683 Ankyrin repeat-containing domain
Gene3D G3DSA:1.25.40.20 no description 4.1e-15 264-365
HMMPfam PF12796 Ank_2 5e-10 265-349
ProfileScan PS50297 ANK_REP_REGION 14.769 288-360
superfamily SSF48403 Ankyrin 8.6e-15 259-373
IPR021094 NPR1/NIM1-like, C-terminal
HMMPfam PF12313 NPR1_like_C 1.2e-58 364-550
IPR024228 Domain of unknown function DUF3420
HMMPfam PF11900 DUF3420 1.2e-05 222-265
no_ID  
Seg seg seg NA 8-30
88-93
268-280
536-550
Pseudomolecule
Chromosome Start End Strand
148874814891842+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00065.1 maker exon 34775 35299 . + . ID=Zjn_sc00065.1.g00040.1.sm.mkhc:exon:1
Zjn_sc00065.1 maker exon 35972 36673 . + . ID=Zjn_sc00065.1.g00040.1.sm.mkhc:exon:2
Zjn_sc00065.1 maker exon 37787 37991 . + . ID=Zjn_sc00065.1.g00040.1.sm.mkhc:exon:3
Zjn_sc00065.1 maker exon 38129 39136 . + . ID=Zjn_sc00065.1.g00040.1.sm.mkhc:exon:4

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