Z. japonica Nagirizaki
Zjn_sc00063.1.g02970.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G44480.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 256 133 255 1e-57 170.3 38.3 44.5
Subject 436 313 435
Annot | Symbols: DUR | NAD(P)-binding Rossmann-fold superfamily protein | chr5:17921515-17923643 FORWARD LENGTH=436
NR ref|XP_004984661.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 256 133 256 4e-63 159 44.1 46.5
Subject 407 284 407
Annot PREDICTED: probable UDP-arabinose 4-epimerase 3 [Setaria italica] gi|836026975|ref|XP_012698261.1| PREDICTED: probable UDP-arabinose 4-epimerase 3 [Setaria italica]
IRGSP Os08t0129700-02_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 256 133 256 3e-65 158.6 43.4 46.5
Subject 406 283 406
Annot
Sbicolor Sobic.001G400000.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 256 133 256 2e-65 159 43.8 46.5
Subject 407 284 407
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00063.1.g02970.1.am.mkhc length: 256 aa.
IPR001509 NAD-dependent epimerase/dehydratase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0044237 cellular metabolic process    
Molecular Function GO:0050662 coenzyme binding    
HMMPfam PF01370 Epimerase 6.8e-05 54-139
142-178
IPR005886 UDP-glucose 4-epimerase GalE
Molecular Function GO:0003978 UDP-glucose 4-epimerase activity    
Biological Process GO:0006012 galactose metabolic process    
HMMPanther PTHR10366:SF39 UDP-GLUCOSE 9.5e-95 56-256
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 1.3e-09 56-134
146-184
IPR025308 UDP-glucose 4-epimerase C-terminal domain
HMMPfam PF13950 Epimerase_Csub 1.1e-17 192-253
no_ID  
Gene3D G3DSA:3.90.25.10 no description 4.2e-31 185-254
HMMPanther PTHR10366 NAD 9.5e-95 56-256
Seg seg seg NA 27-44
superfamily SSF51735 NAD(P)-binding 1.5e-41 56-253
Pseudomolecule
Chromosome Start End Strand
13687334691797+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00063.1 maker exon 1485990 1486286 . - . ID=Zjn_sc00063.1.g02970.1.am.mkhc:exon:7
Zjn_sc00063.1 maker exon 1486520 1486771 . - . ID=Zjn_sc00063.1.g02970.1.am.mkhc:exon:6
Zjn_sc00063.1 maker exon 1487074 1487218 . - . ID=Zjn_sc00063.1.g02970.1.am.mkhc:exon:5
Zjn_sc00063.1 maker exon 1487868 1488009 . - . ID=Zjn_sc00063.1.g02970.1.am.mkhc:exon:4
Zjn_sc00063.1 maker exon 1488283 1488374 . - . ID=Zjn_sc00063.1.g02970.1.am.mkhc:exon:3
Zjn_sc00063.1 maker exon 1489432 1489556 . - . ID=Zjn_sc00063.1.g02970.1.am.mkhc:exon:2
Zjn_sc00063.1 maker exon 1490330 1490453 . - . ID=Zjn_sc00063.1.g02970.1.am.mkhc:exon:1

Top