Z. japonica Nagirizaki
Zjn_sc00063.1.g02610.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
No_hits |
| NR |
ref|XP_002445013.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
133 |
2 |
111 |
2e-38 |
376.7 |
60.9 |
68.4 |
| Subject |
501 |
1 |
115 |
|
| Annot |
hypothetical protein SORBIDRAFT_07g002760 [Sorghum bicolor] gi|241941363|gb|EES14508.1| hypothetical protein SORBIDRAFT_07g002760 [Sorghum bicolor] |
| IRGSP |
Os06t0713400-01_chr06_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
133 |
1 |
114 |
2e-34 |
386.5 |
57.1 |
69.9 |
| Subject |
514 |
29 |
141 |
|
| Annot |
|
| Sbicolor |
Sobic.007G031900.2.p|Chr07|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
133 |
2 |
111 |
1e-41 |
376.7 |
60.9 |
68.4 |
| Subject |
501 |
1 |
115 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00063.1.g02610.1.sm.mkhc |
length: 133 aa. |
| IPR001810 |
F-box domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00646 |
F-box |
7.2e-06 |
25-68 |
| HMMSmart |
SM00256 |
A |
0.0021 |
30-70 |
| ProfileScan |
PS50181 |
FBOX |
9.524 |
24-72 |
| superfamily |
SSF81383 |
F-box |
4.9e-08 |
22-116 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.1280.50 |
no description |
3.1e-06 |
23-61 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 13 | 833415 | 835553 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00063.1 |
maker |
exon |
1342234 |
1342531 |
. |
+ |
. |
ID=Zjn_sc00063.1.g02610.1.sm.mkhc:exon:1 |
| Zjn_sc00063.1 |
maker |
exon |
1343591 |
1343826 |
. |
+ |
. |
ID=Zjn_sc00063.1.g02610.1.sm.mkhc:exon:2 |
| Zjn_sc00063.1 |
maker |
exon |
1344303 |
1344372 |
. |
+ |
. |
ID=Zjn_sc00063.1.g02610.1.sm.mkhc:exon:3 |