Z. japonica Nagirizaki
Zjn_sc00063.1.g02600.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 No_hits
NR ref|XP_002445013.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 249 28 139 2e-24 201.2 26.5 30.9
Subject 501 3 107
Annot hypothetical protein SORBIDRAFT_07g002760 [Sorghum bicolor] gi|241941363|gb|EES14508.1| hypothetical protein SORBIDRAFT_07g002760 [Sorghum bicolor]
IRGSP Os06t0713400-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 249 57 139 6e-22 206.4 21.3 27.3
Subject 514 49 130
Annot
Sbicolor Sobic.007G031900.2.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 249 28 139 2e-27 201.2 26.5 30.9
Subject 501 3 107
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00063.1.g02600.1.sm.mkhc length: 249 aa.
IPR001810 F-box domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 1.6e-07 60-98
HMMSmart SM00256 A 0.00072 65-105
ProfileScan PS50181 FBOX 10.716 59-92
superfamily SSF81383 F-box 1.7e-09 52-92
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 1.8e-07 59-93
Seg seg seg NA 19-57
Pseudomolecule
Chromosome Start End Strand
13837088839928-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00063.1 maker exon 1337859 1337909 . + . ID=Zjn_sc00063.1.g02600.1.sm.mkhc:exon:1
Zjn_sc00063.1 maker exon 1337957 1338008 . + . ID=Zjn_sc00063.1.g02600.1.sm.mkhc:exon:2
Zjn_sc00063.1 maker exon 1338051 1338148 . + . ID=Zjn_sc00063.1.g02600.1.sm.mkhc:exon:3
Zjn_sc00063.1 maker exon 1339063 1339275 . + . ID=Zjn_sc00063.1.g02600.1.sm.mkhc:exon:4
Zjn_sc00063.1 maker exon 1339721 1339729 . + . ID=Zjn_sc00063.1.g02600.1.sm.mkhc:exon:5
Zjn_sc00063.1 maker exon 1340373 1340699 . + . ID=Zjn_sc00063.1.g02600.1.sm.mkhc:exon:6

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