Z. japonica Nagirizaki
Zjn_sc00063.1.g02500.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G20340.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 527 27 522 e-139 93 42.1 63
Subject 490 9 488
Annot | Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr2:8779804-8782490 FORWARD LENGTH=490
NR ref|NP_001169175.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 527 1 522 0.0 97.7 76.5 84.4
Subject 515 1 513
Annot uncharacterized protein LOC100383025 [Zea mays] gi|223975313|gb|ACN31844.1| unknown [Zea mays] gi|223975749|gb|ACN32062.1| unknown [Zea mays] gi|413917468|gb|AFW57400.1| hypothetical protein ZEAMMB73_521692 [Zea mays]
IRGSP Os08t0140500-00_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 527 1 522 0.0 99.2 75.7 83.1
Subject 523 1 516
Annot
Sbicolor Sobic.007G035500.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 527 1 522 0.0 98.5 75.9 84.3
Subject 519 1 512
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00063.1.g02500.1.sm.mk length: 527 aa.
IPR002129 Pyridoxal phosphate-dependent decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0016831 carboxy-lyase activity    
Biological Process GO:0019752 carboxylic acid metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00282 Pyridoxal_deC 1.9e-121 64-451
IPR010977 Aromatic-L-amino-acid decarboxylase
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0016831 carboxy-lyase activity    
FPrintScan PR00800 YHDCRBOXLASE 9.3e-46 35-54
58-75
102-121
123-141
142-161
390-405
433-452
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 5.4e-99 113-405
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 4.4e-34 406-521
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 3e-123 30-523
IPR021115 Pyridoxal-phosphate binding site
Molecular Function GO:0016831 carboxy-lyase activity    
PatternScan PS00392 DDC_GAD_HDC_YDC NA 334-355
no_ID  
Gene3D G3DSA:1.20.1340.10 no description 1.3e-22 30-110
HMMPanther PTHR11999 GROUP 2e-232 13-527
HMMPanther PTHR11999:SF11 AROMATIC 2e-232 13-527
Seg seg seg NA 114-126
136-157
165-185
342-354
Pseudomolecule
Chromosome Start End Strand
13895245896828+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00063.1 maker_non_over exon 1280959 1282542 . - . ID=Zjn_sc00063.1.g02500.1.sm.mk:exon:1

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