Z. japonica Nagirizaki
Zjn_sc00063.1.g02060.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G12420.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 610 5 585 0.0 96.2 55.2 69
Subject 587 6 566
Annot | Symbols: SKU5 | Cupredoxin superfamily protein | chr4:7349941-7352868 REVERSE LENGTH=587
NR ref|XP_002445068.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 610 21 607 0.0 96.2 77.2 84.3
Subject 587 23 584
Annot hypothetical protein SORBIDRAFT_07g003590 [Sorghum bicolor] gi|241941418|gb|EES14563.1| hypothetical protein SORBIDRAFT_07g003590 [Sorghum bicolor]
IRGSP Os08t0154250-01_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 610 21 607 0.0 98.4 74.3 82.6
Subject 600 34 597
Annot
Sbicolor Sobic.007G043300.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 610 21 607 0.0 96.2 77.2 84.3
Subject 587 23 584
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00063.1.g02060.1.sm.mk length: 610 aa.
IPR001117 Multicopper oxidase, type 1
method AccNumber shortName E-value location
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00394 Cu-oxidase 4.6e-42 182-334
IPR008972 Cupredoxin
Gene3D G3DSA:2.60.40.420 no description 3.3e-15 57-168
177-362
409-573
superfamily SSF49503 Cupredoxins 2.7e-22 175-375
66-197
381-579
IPR011706 Multicopper oxidase, type 2
Molecular Function GO:0005507 copper ion binding    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF07731 Cu-oxidase_2 1.2e-18 419-546
IPR011707 Multicopper oxidase, type 3
Molecular Function GO:0005507 copper ion binding    
HMMPfam PF07732 Cu-oxidase_3 5.4e-38 58-169
no_ID  
HMMPanther PTHR11709 MULTI-COPPER 0 68-607
HMMPanther PTHR11709:SF21 SUBFAMILY 0 68-607
Seg seg seg NA 2-22
82-96
Pseudomolecule
Chromosome Start End Strand
1310927601097228-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00063.1 maker_non_over exon 1080559 1080730 . + . ID=Zjn_sc00063.1.g02060.1.sm.mk:exon:1
Zjn_sc00063.1 maker_non_over exon 1081354 1081385 . + . ID=Zjn_sc00063.1.g02060.1.sm.mk:exon:2
Zjn_sc00063.1 maker_non_over exon 1081531 1081640 . + . ID=Zjn_sc00063.1.g02060.1.sm.mk:exon:3
Zjn_sc00063.1 maker_non_over exon 1082296 1082566 . + . ID=Zjn_sc00063.1.g02060.1.sm.mk:exon:4
Zjn_sc00063.1 maker_non_over exon 1082725 1082863 . + . ID=Zjn_sc00063.1.g02060.1.sm.mk:exon:5
Zjn_sc00063.1 maker_non_over exon 1083326 1083692 . + . ID=Zjn_sc00063.1.g02060.1.sm.mk:exon:6
Zjn_sc00063.1 maker_non_over exon 1083863 1084213 . + . ID=Zjn_sc00063.1.g02060.1.sm.mk:exon:7
Zjn_sc00063.1 maker_non_over exon 1084325 1084403 . + . ID=Zjn_sc00063.1.g02060.1.sm.mk:exon:8
Zjn_sc00063.1 maker_non_over exon 1084530 1084729 . + . ID=Zjn_sc00063.1.g02060.1.sm.mk:exon:9
Zjn_sc00063.1 maker_non_over exon 1084808 1084889 . + . ID=Zjn_sc00063.1.g02060.1.sm.mk:exon:10
Zjn_sc00063.1 maker_non_over exon 1084998 1085027 . + . ID=Zjn_sc00063.1.g02060.1.sm.mk:exon:11

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