| TAIR10 | AT1G23820.1 | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
|---|---|---|---|---|---|---|---|---|---|
| Query | 272 | 1 | 272 | e-113 | 139 | 78.3 | 87.5 | ||
| Subject | 378 | 45 | 378 | ||||||
| Annot | | Symbols: SPDS1 | spermidine synthase 1 | chr1:8420278-8422724 FORWARD LENGTH=378 | ||||||||
| NR | ref|XP_006662051.1| | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
| Query | 272 | 5 | 272 | e-130 | 120.2 | 90.4 | 93 | ||
| Subject | 327 | 6 | 327 | ||||||
| Annot | PREDICTED: spermidine synthase 1-like isoform X1 [Oryza brachyantha] | ||||||||
| IRGSP | Os07t0408700-02_chr07_irgsp1_locus | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
| Query | 272 | 35 | 272 | e-127 | 118.8 | 84.2 | 85.7 | ||
| Subject | 323 | 27 | 323 | ||||||
| Annot | |||||||||
| Sbicolor | Sobic.002G113800.1.p|Chr02|gene | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
| Query | 272 | 35 | 272 | e-128 | 122.8 | 84.6 | 86 | ||
| Subject | 334 | 38 | 334 | ||||||
| Annot | |||||||||
| Zjn_sc00062.1.g01080.1.sm.mkhc | length: 272 aa. | |||
| IPR001045 | Spermidine/spermine synthases family | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003824 | catalytic activity | ||
| HMMPanther | PTHR11558 | SPERMIDINE/SPERMINE | 3e-114 | 32-270 |
| HMMPfam | PF01564 | Spermine_synth | 4e-23 | 41-119 143-226 |
| ProfileScan | PS51006 | SPERMIDINE_SYNTHASE_2 | 18.820 | 142-268 41-119 |
| no_ID | ||||
| Gene3D | G3DSA:2.30.140.10 | no description | 3.9e-28 | 32-92 |
| Gene3D | G3DSA:3.40.50.150 | no description | 2e-37 | 94-119 143-268 |
| HMMPanther | PTHR11558:SF11 | SPERMIDINE | 3e-114 | 32-270 |
| Seg | seg | seg | NA | 2-13 16-34 |
| superfamily | SSF53335 | S-adenosyl-L-methionine-dependent | 1.6e-55 | 38-269 |
| scaffold | source | type | start | end | score | strand | phase | attributes |
|---|---|---|---|---|---|---|---|---|
| Zjn_sc00062.1 | maker | exon | 1250437 | 1250725 | . | + | . | ID=Zjn_sc00062.1.g01080.1.sm.mkhc:exon:1 |
| Zjn_sc00062.1 | maker | exon | 1251463 | 1251539 | . | + | . | ID=Zjn_sc00062.1.g01080.1.sm.mkhc:exon:2 |
| Zjn_sc00062.1 | maker | exon | 1251624 | 1251746 | . | + | . | ID=Zjn_sc00062.1.g01080.1.sm.mkhc:exon:3 |
| Zjn_sc00062.1 | maker | exon | 1253223 | 1253295 | . | + | . | ID=Zjn_sc00062.1.g01080.1.sm.mkhc:exon:4 |
| Zjn_sc00062.1 | maker | exon | 1253538 | 1253733 | . | + | . | ID=Zjn_sc00062.1.g01080.1.sm.mkhc:exon:5 |
| Zjn_sc00062.1 | maker | exon | 1253799 | 1253928 | . | + | . | ID=Zjn_sc00062.1.g01080.1.sm.mkhc:exon:6 |
| Zjn_sc00062.1 | maker | exon | 1254001 | 1254502 | . | + | . | ID=Zjn_sc00062.1.g01080.1.sm.mkhc:exon:7 |