Z. japonica Nagirizaki
Zjn_sc00059.1.g01850.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G34830.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 444 153 268 3e-49 96.2 20.5 22.1
Subject 427 174 283
Annot | Symbols: WRKY35, MEE24, AtWRKY35 | WRKY DNA-binding protein 35 | chr2:14693839-14696378 REVERSE LENGTH=427
NR ref|XP_008658838.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 444 1 418 1e-84 99.1 50.7 60.8
Subject 440 1 434
Annot PREDICTED: probable WRKY transcription factor 35 [Zea mays] gi|414867970|tpg|DAA46527.1| TPA: putative WRKY DNA-binding domain superfamily protein [Zea mays] gi|645165605|gb|AIB04580.1| WRKY transcription factor, partial [Zea mays]
IRGSP Os04t0597300-01_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 444 152 272 2e-52 93.2 22.1 23.9
Subject 414 122 235
Annot
Sbicolor Sobic.001G282400.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 444 1 416 1e-83 96.2 51.1 59.5
Subject 427 1 418
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00059.1.g01850.1.am.mk length: 444 aa.
IPR003657 DNA-binding WRKY
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
Gene3D G3DSA:2.20.25.80 no description 5.7e-30 194-260
HMMPfam PF03106 WRKY 3.9e-28 200-258
HMMSmart SM00774 DNA 6.3e-37 199-259
ProfileScan PS50811 WRKY 32.742 194-260
superfamily SSF118290 WRKY 2.8e-25 190-261
no_ID  
HMMPanther PTHR32096 FAMILY 1.4e-43 200-270
HMMPanther PTHR32096:SF0 SUBFAMILY 1.4e-43 200-270
Seg seg seg NA 84-98
101-113
174-187
275-298
366-391
Pseudomolecule
Chromosome Start End Strand
862758866280153+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00059.1 maker_non_over exon 1303713 1304212 . + . ID=Zjn_sc00059.1.g01850.1.am.mk:exon:1
Zjn_sc00059.1 maker_non_over exon 1304315 1305014 . + . ID=Zjn_sc00059.1.g01850.1.am.mk:exon:2
Zjn_sc00059.1 maker_non_over exon 1307846 1307980 . + . ID=Zjn_sc00059.1.g01850.1.am.mk:exon:3

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