Z. japonica Nagirizaki
Zjn_sc00059.1.g00100.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G24930.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 289 214 262 1e-15 140.5 12.5 14.5
Subject 406 338 386
Annot | Symbols: ATCOL4, COL4 | CONSTANS-like 4 | chr5:8589325-8590949 FORWARD LENGTH=406
NR ref|XP_008658271.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 289 1 289 2e-73 97.9 72.3 76.5
Subject 283 1 283
Annot PREDICTED: two-component response regulator-like PRR37 [Zea mays]
IRGSP Os10t0560400-01_chr10_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 289 1 289 2e-51 102.8 63.3 68.5
Subject 297 1 297
Annot
Sbicolor Sobic.001G298400.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 289 9 289 3e-74 103.1 73 77.2
Subject 298 10 298
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00059.1.g00100.1.sm.mk length: 289 aa.
IPR010402 CCT domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF06203 CCT 8.9e-20 215-258
ProfileScan PS51017 CCT 16.172 215-257
no_ID  
HMMPanther PTHR31319 FAMILY 2.8e-20 212-260
Seg seg seg NA 2-35
46-72
153-169
198-206
221-233
Pseudomolecule
Chromosome Start End Strand
850310815034137-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00059.1 maker_non_over exon 58908 59243 . - . ID=Zjn_sc00059.1.g00100.1.sm.mk:exon:2
Zjn_sc00059.1 maker_non_over exon 61431 61964 . - . ID=Zjn_sc00059.1.g00100.1.sm.mk:exon:1

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