Z. japonica Nagirizaki
Zjn_sc00058.1.g02930.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G14880.4 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 337 18 336 e-123 95.5 67.1 79.5
Subject 322 3 321
Annot | Symbols: OASA1 | O-acetylserine (thiol) lyase (OAS-TL) isoform A1 | chr4:8518209-8520050 REVERSE LENGTH=322
NR ref|XP_004977989.2| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 337 20 337 e-150 96.1 86.9 91.4
Subject 324 2 319
Annot PREDICTED: cysteine synthase-like [Setaria italica]
IRGSP Os03t0747800-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 337 15 337 e-137 96.4 73.9 86.4
Subject 325 3 325
Annot
Sbicolor Sobic.006G077900.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 337 1 337 e-152 103.9 86.1 93.2
Subject 350 1 350
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00058.1.g02930.1.am.mk length: 337 aa.
IPR001216 Cysteine synthase/cystathionine beta-synthase P-phosphate-binding site
method AccNumber shortName E-value location
Biological Process GO:0006535 cysteine biosynthetic process from serine    
PatternScan PS00901 CYS_SYNTHASE NA 50-68
IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily
HMMPfam PF00291 PALP 3.1e-57 25-310
superfamily SSF53686 Tryptophan 6.8e-98 18-337
IPR005856 Cysteine synthase K/M
Molecular Function GO:0004124 cysteine synthase activity    
Biological Process GO:0006535 cysteine biosynthetic process from serine    
HMMTigr TIGR01136 cysKM: 2.4e-127 25-323
IPR005859 Cysteine synthase A
Molecular Function GO:0004124 cysteine synthase activity    
Biological Process GO:0006535 cysteine biosynthetic process from serine    
HMMTigr TIGR01139 cysK: 4.2e-131 25-323
no_ID  
Gene3D G3DSA:3.40.50.1100 no description 4.7e-79 56-153
154-324
HMMPanther PTHR10314 SER/THR 2.6e-178 7-333
HMMPanther PTHR10314:SF8 CYSTEINE 2.6e-178 7-333
Seg seg seg NA 193-205
281-298
Pseudomolecule
Chromosome Start End Strand
1142984244300088-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00058.1 maker_non_over exon 1385864 1385941 . + . ID=Zjn_sc00058.1.g02930.1.am.mk:exon:1
Zjn_sc00058.1 maker_non_over exon 1386079 1386188 . + . ID=Zjn_sc00058.1.g02930.1.am.mk:exon:2
Zjn_sc00058.1 maker_non_over exon 1386281 1386338 . + . ID=Zjn_sc00058.1.g02930.1.am.mk:exon:3
Zjn_sc00058.1 maker_non_over exon 1386420 1386821 . + . ID=Zjn_sc00058.1.g02930.1.am.mk:exon:4
Zjn_sc00058.1 maker_non_over exon 1386917 1387108 . + . ID=Zjn_sc00058.1.g02930.1.am.mk:exon:5
Zjn_sc00058.1 maker_non_over exon 1387274 1387354 . + . ID=Zjn_sc00058.1.g02930.1.am.mk:exon:6
Zjn_sc00058.1 maker_non_over exon 1387436 1387528 . + . ID=Zjn_sc00058.1.g02930.1.am.mk:exon:7

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