Z. japonica Nagirizaki
Zjn_sc00058.1.g02560.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G31220.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 217 138 216 2e-30 134.6 25.3 31.8
Subject 292 213 291
Annot | Symbols: | Formyl transferase | chr1:11157064-11158408 FORWARD LENGTH=292
NR ref|XP_008799345.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 217 39 216 8e-64 114.7 53.5 65
Subject 249 71 248
Annot PREDICTED: phosphoribosylglycinamide formyltransferase, chloroplastic isoform X2 [Phoenix dactylifera]
IRGSP Os08t0500900-01_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 217 62 217 9e-64 133.6 59.4 65
Subject 290 76 290
Annot
Sbicolor Sobic.006G083100.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 217 61 216 9e-65 170.5 60.8 65.9
Subject 370 155 369
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00058.1.g02560.1.sm.mkhc length: 217 aa.
IPR001555 Phosphoribosylglycinamide formyltransferase, active site
method AccNumber shortName E-value location
Molecular Function GO:0008168 methyltransferase activity    
PatternScan PS00373 GART NA 141-164
IPR002376 Formyl transferase, N-terminal
Biological Process GO:0009058 biosynthetic process    
Molecular Function GO:0016742 hydroxymethyl-, formyl- and related transferase activity    
Gene3D G3DSA:3.40.50.170 no description 5.3e-17 63-124
137-199
HMMPfam PF00551 Formyl_trans_N 1.4e-14 63-137
138-189
superfamily SSF53328 Formyltransferase 1.2e-31 63-217
no_ID  
HMMPanther PTHR10520 TRIFUNCTIONAL 1.2e-70 29-206
HMMPanther PTHR10520:SF13 SUBFAMILY 1.2e-70 29-206
Seg seg seg NA 40-60
Pseudomolecule
Chromosome Start End Strand
1144574464460479-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00058.1 maker exon 1225473 1225598 . + . ID=Zjn_sc00058.1.g02560.1.sm.mkhc:exon:1
Zjn_sc00058.1 maker exon 1225921 1226095 . + . ID=Zjn_sc00058.1.g02560.1.sm.mkhc:exon:2
Zjn_sc00058.1 maker exon 1226175 1226286 . + . ID=Zjn_sc00058.1.g02560.1.sm.mkhc:exon:3
Zjn_sc00058.1 maker exon 1227017 1227143 . + . ID=Zjn_sc00058.1.g02560.1.sm.mkhc:exon:4
Zjn_sc00058.1 maker exon 1227224 1228506 . + . ID=Zjn_sc00058.1.g02560.1.sm.mkhc:exon:5

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