Z. japonica Nagirizaki
Zjn_sc00058.1.g01920.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G71450.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 176 28 109 4e-23 104 29 34.7
Subject 183 24 103
Annot | Symbols: | Integrase-type DNA-binding superfamily protein | chr1:26927088-26927639 FORWARD LENGTH=183
NR ref|XP_004975709.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 176 28 176 2e-50 115.9 69.3 72.2
Subject 204 31 204
Annot PREDICTED: ethylene-responsive transcription factor ERF027-like [Setaria italica]
IRGSP Os02t0558700-00_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 176 28 176 6e-38 104.5 53.4 59.7
Subject 184 25 184
Annot
Sbicolor Sobic.005G087600.1.p|Chr05|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 176 15 174 1e-33 162.5 52.8 63.6
Subject 286 87 280
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00058.1.g01920.1.sm.mk length: 176 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 5.7e-10 28-39
50-66
Gene3D G3DSA:3.30.730.10 no description 9.3e-30 27-85
HMMPfam PF00847 AP2 1.1e-14 27-76
HMMSmart SM00380 DNA-binding 1.2e-35 27-90
ProfileScan PS51032 AP2_ERF 23.406 27-84
IPR016177 DNA-binding domain
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 1.9e-22 26-87
no_ID  
HMMPanther PTHR31985 FAMILY 1.5e-28 28-87
Seg seg seg NA 17-27
60-71
Pseudomolecule
Chromosome Start End Strand
1147511894752088-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00058.1 maker_non_over exon 933864 934121 . + . ID=Zjn_sc00058.1.g01920.1.sm.mk:exon:1
Zjn_sc00058.1 maker_non_over exon 934491 934763 . + . ID=Zjn_sc00058.1.g01920.1.sm.mk:exon:2

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