Z. japonica Nagirizaki
Zjn_sc00058.1.g00930.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G12900.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 402 1 402 0.0 99.3 82.6 90.8
Subject 399 8 399
Annot | Symbols: GAPA-2 | glyceraldehyde 3-phosphate dehydrogenase A subunit 2 | chr1:4392634-4394283 REVERSE LENGTH=399
NR ref|XP_004975847.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 402 1 402 0.0 99.8 91 95.5
Subject 401 1 401
Annot PREDICTED: glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic [Setaria italica]
IRGSP Os04t0459500-02_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 402 1 402 0.0 100 90.8 95.8
Subject 402 1 402
Annot
Sbicolor Sobic.006G105900.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 402 2 402 0.0 104 88.8 95
Subject 418 24 418
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00058.1.g00930.1.am.mk length: 402 aa.
IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I
method AccNumber shortName E-value location
Biological Process GO:0006006 glucose metabolic process    
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Molecular Function GO:0050661 NADP binding    
Molecular Function GO:0051287 NAD binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMTigr TIGR01534 GAPDH-I: 1.8e-130 69-392
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 4.1e-68 66-227
IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF00044 Gp_dh_N 3.5e-53 69-219
HMMSmart SM00846 Glyceraldehyde 1.2e-78 68-219
IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF02800 Gp_dh_C 2.5e-67 224-380
IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
PatternScan PS00071 GAPDH NA 217-224
IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family
Molecular Function GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00078 G3PDHDRGNASE 4.1e-39 177-190
213-231
240-256
296-313
336-351
HMMPIR PIRSF000149 Glyceraldehyde-3-phosphate 1e-176 66-402
HMMPanther PTHR10836 GLYCERALDEHYDE 5.9e-193 48-401
no_ID  
Gene3D G3DSA:3.30.360.10 no description 2.2e-70 228-382
Seg seg seg NA 253-270
306-315
superfamily SSF51735 NAD(P)-binding 2.7e-60 68-241
superfamily SSF55347 Glyceraldehyde-3-phosphate 1.4e-76 219-381
Pseudomolecule
Chromosome Start End Strand
1151190515120438+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00058.1 maker_non_over exon 565514 566016 . - . ID=Zjn_sc00058.1.g00930.1.am.mk:exon:3
Zjn_sc00058.1 maker_non_over exon 566113 566698 . - . ID=Zjn_sc00058.1.g00930.1.am.mk:exon:2
Zjn_sc00058.1 maker_non_over exon 566782 566901 . - . ID=Zjn_sc00058.1.g00930.1.am.mk:exon:1

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