Z. japonica Nagirizaki
Zjn_sc00057.1.g01810.1.am.mkhc
Sequence
-
BLAST
| TAIR10 |
AT4G08900.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
207 |
1 |
207 |
e-110 |
165.2 |
91.8 |
95.2 |
| Subject |
342 |
136 |
342 |
|
| Annot |
| Symbols: | arginase | chr4:5703499-5705180 FORWARD LENGTH=342 |
| NR |
ref|XP_002446022.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
207 |
1 |
207 |
e-114 |
164.3 |
97.6 |
99 |
| Subject |
340 |
134 |
340 |
|
| Annot |
hypothetical protein SORBIDRAFT_06g000580 [Sorghum bicolor] gi|241937205|gb|EES10350.1| hypothetical protein SORBIDRAFT_06g000580 [Sorghum bicolor] |
| IRGSP |
Os04t0106300-01_chr04_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
207 |
1 |
207 |
e-114 |
164.3 |
94.7 |
98.1 |
| Subject |
340 |
134 |
340 |
|
| Annot |
|
| Sbicolor |
Sobic.006G004500.1.p|Chr06|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
207 |
1 |
207 |
e-116 |
164.3 |
97.6 |
99 |
| Subject |
340 |
134 |
340 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00057.1.g01810.1.am.mkhc |
length: 207 aa. |
| IPR006035 |
Ureohydrolase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016813 |
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines |
|
|
| Molecular Function |
GO:0046872 |
metal ion binding |
|
|
| HMMPanther |
PTHR11358 |
ARGINASE/AGMATINASE |
4.4e-163 |
1-207 |
| HMMPfam |
PF00491 |
Arginase |
8.3e-58 |
3-201 |
| ProfileScan |
PS51409 |
ARGINASE_2 |
43.979 |
1-207 |
| IPR020855 |
Ureohydrolase, manganese-binding site |
| Molecular Function |
GO:0016813 |
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines |
|
|
| Molecular Function |
GO:0046872 |
metal ion binding |
|
|
| PatternScan |
PS01053 |
ARGINASE_1 |
NA |
133-154 |
| IPR023696 |
Ureohydrolase domain |
| Gene3D |
G3DSA:3.40.800.10 |
no description |
3.8e-61 |
4-206 |
| no_ID |
|
| HMMPanther |
PTHR11358:SF4 |
ARGINASE-RELATED |
4.4e-163 |
1-207 |
| superfamily |
SSF52768 |
Arginase/deacetylase |
7.4e-57 |
1-205 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 12 | 249985 | 253072 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00057.1 |
maker |
exon |
1657245 |
1657781 |
. |
- |
. |
ID=Zjn_sc00057.1.g01810.1.am.mkhc:exon:6 |
| Zjn_sc00057.1 |
maker |
exon |
1657987 |
1658097 |
. |
- |
. |
ID=Zjn_sc00057.1.g01810.1.am.mkhc:exon:5 |
| Zjn_sc00057.1 |
maker |
exon |
1658398 |
1658607 |
. |
- |
. |
ID=Zjn_sc00057.1.g01810.1.am.mkhc:exon:4 |
| Zjn_sc00057.1 |
maker |
exon |
1658764 |
1658897 |
. |
- |
. |
ID=Zjn_sc00057.1.g01810.1.am.mkhc:exon:3 |
| Zjn_sc00057.1 |
maker |
exon |
1658989 |
1659148 |
. |
- |
. |
ID=Zjn_sc00057.1.g01810.1.am.mkhc:exon:2 |
| Zjn_sc00057.1 |
maker |
exon |
1660288 |
1660332 |
. |
- |
. |
ID=Zjn_sc00057.1.g01810.1.am.mkhc:exon:1 |