Z. japonica Nagirizaki
Zjn_sc00057.1.g00660.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G24220.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 343 15 325 1e-70 168.2 45.2 60.1
Subject 577 34 383
Annot | Symbols: NCED6, ATNCED6 | nine-cis-epoxycarotenoid dioxygenase 6 | chr3:8761439-8763172 FORWARD LENGTH=577
NR gb|EMT30112.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 343 38 325 6e-96 126.5 59.8 69.1
Subject 434 34 369
Annot hypothetical protein F775_13945 [Aegilops tauschii]
IRGSP Os07t0154100-01_chr07_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 343 45 325 1e-65 169.7 45.2 56
Subject 582 58 380
Annot
Sbicolor Sobic.002G037400.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 343 45 325 6e-65 165.9 44.9 56.3
Subject 569 53 369
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00057.1.g00660.1.am.mk length: 343 aa.
IPR004294 Carotenoid oxygenase
method AccNumber shortName E-value location
HMMPanther PTHR10543 BETA-CAROTENE 1.6e-83 20-325
HMMPfam PF03055 RPE65 1.3e-28 83-187
205-326
no_ID  
HMMPanther PTHR10543:SF1 9-CIS-EPOXYCAROTENOID 1.6e-83 20-325
Seg seg seg NA 17-26
186-210
326-342
Pseudomolecule
Chromosome Start End Strand
1212375201241114+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00057.1 maker_non_over exon 669203 669299 . - . ID=Zjn_sc00057.1.g00660.1.am.mk:exon:3
Zjn_sc00057.1 maker_non_over exon 671352 671665 . - . ID=Zjn_sc00057.1.g00660.1.am.mk:exon:2
Zjn_sc00057.1 maker_non_over exon 672177 672797 . - . ID=Zjn_sc00057.1.g00660.1.am.mk:exon:1

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