Z. japonica Nagirizaki
Zjn_sc00056.1.g04790.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G00430.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 288 1 288 e-146 99.7 85.4 94.1
Subject 287 1 287
Annot | Symbols: TMP-C, PIP1;4, PIP1E | plasma membrane intrinsic protein 1;4 | chr4:186143-187531 REVERSE LENGTH=287
NR gb|EMS49467.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 288 1 288 e-156 170.8 92.4 96.2
Subject 492 205 492
Annot Aquaporin PIP1-2 [Triticum urartu]
IRGSP Os02t0666200-02_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 288 1 288 e-157 100.3 92.7 97.6
Subject 289 1 289
Annot
Sbicolor Sobic.006G176700.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 288 1 288 e-159 100 93.4 96.9
Subject 288 1 288
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00056.1.g04790.1.sm.mkhc length: 288 aa.
IPR000425 Major intrinsic protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00783 MINTRINSICP 1.7e-70 54-73
96-120
133-152
182-200
218-240
258-278
HMMPanther PTHR19139 AQUAPORIN 1.8e-227 1-287
HMMPfam PF00230 MIP 3.3e-84 46-275
HMMTigr TIGR00861 MIP: 1.7e-65 58-274
IPR022357 Major intrinsic protein, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
PatternScan PS00221 MIP NA 114-122
IPR023271 Aquaporin-like
Gene3D G3DSA:1.20.1080.10 no description 1.2e-88 25-280
superfamily SSF81338 Aquaporin-like 2.3e-60 43-279
no_ID  
HMMPanther PTHR19139:SF56 SUBFAMILY 1.8e-227 1-287
Pseudomolecule
Chromosome Start End Strand
1178169367818775+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00056.1 maker exon 1927277 1927674 . + . ID=Zjn_sc00056.1.g04790.1.sm.mkhc:exon:1
Zjn_sc00056.1 maker exon 1927768 1928063 . + . ID=Zjn_sc00056.1.g04790.1.sm.mkhc:exon:2
Zjn_sc00056.1 maker exon 1928174 1928314 . + . ID=Zjn_sc00056.1.g04790.1.sm.mkhc:exon:3
Zjn_sc00056.1 maker exon 1928809 1929116 . + . ID=Zjn_sc00056.1.g04790.1.sm.mkhc:exon:4

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