Z. japonica Nagirizaki
Zjn_sc00056.1.g04580.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G11600.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 168 1 165 2e-82 138.1 85.1 90.5
Subject 232 64 228
Annot | Symbols: ATGPX6, PHGPX, LSC803, GPX6 | glutathione peroxidase 6 | chr4:7010021-7011330 REVERSE LENGTH=232
NR ref|XP_002446921.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 168 1 168 4e-91 100 98.2 98.8
Subject 168 1 168
Annot hypothetical protein SORBIDRAFT_06g024920 [Sorghum bicolor] gi|48374968|gb|AAT42166.1| putative glutathione peroxidase [Sorghum bicolor] gi|241938104|gb|EES11249.1| hypothetical protein SORBIDRAFT_06g024920 [Sorghum bicolor] gi|530278482|gb|AGT16461.1| phospholipid-hydroperoxide glutathione peroxidase [Saccharum hybrid cultivar R570]
IRGSP Os04t0556300-01_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 168 1 168 2e-90 100 94.6 97.6
Subject 168 1 168
Annot
Sbicolor Sobic.006G173900.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 168 1 168 6e-94 100 98.2 98.8
Subject 168 1 168
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00056.1.g04580.1.sm.mkhc length: 168 aa.
IPR000889 Glutathione peroxidase
method AccNumber shortName E-value location
Molecular Function GO:0004602 glutathione peroxidase activity    
Biological Process GO:0006979 response to oxidative stress    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR01011 GLUTPROXDASE 1.7e-22 28-45
64-80
129-138
HMMPIR PIRSF000303 Glutathione 5e-80 1-168
HMMPanther PTHR11592 GLUTATHIONE 1e-99 2-166
HMMPfam PF00255 GSHPx 8.5e-46 10-118
PatternScan PS00460 GLUTATHIONE_PEROXID_1 NA 30-45
PatternScan PS00763 GLUTATHIONE_PEROXID_2 NA 67-74
ProfileScan PS51355 GLUTATHIONE_PEROXID_3 76.290 1-168
IPR012336 Thioredoxin-like fold
Gene3D G3DSA:3.40.30.10 no description 2.7e-77 9-166
superfamily SSF52833 Thioredoxin-like 4.9e-64 8-167
no_ID  
HMMPanther PTHR11592:SF0 SUBFAMILY 1e-99 2-166
Pseudomolecule
Chromosome Start End Strand
1177303067733530+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00056.1 maker exon 1840647 1840796 . + . ID=Zjn_sc00056.1.g04580.1.sm.mkhc:exon:1
Zjn_sc00056.1 maker exon 1841235 1841311 . + . ID=Zjn_sc00056.1.g04580.1.sm.mkhc:exon:2
Zjn_sc00056.1 maker exon 1841617 1841678 . + . ID=Zjn_sc00056.1.g04580.1.sm.mkhc:exon:3
Zjn_sc00056.1 maker exon 1841845 1841963 . + . ID=Zjn_sc00056.1.g04580.1.sm.mkhc:exon:4
Zjn_sc00056.1 maker exon 1842530 1842697 . + . ID=Zjn_sc00056.1.g04580.1.sm.mkhc:exon:5
Zjn_sc00056.1 maker exon 1842800 1843871 . + . ID=Zjn_sc00056.1.g04580.1.sm.mkhc:exon:6

Top