Z. japonica Nagirizaki
Zjn_sc00056.1.g03120.1.am.mk
Sequence
-
BLAST
| TAIR10 |
AT4G04930.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
351 |
6 |
350 |
e-150 |
94.6 |
70.9 |
79.8 |
| Subject |
332 |
14 |
332 |
|
| Annot |
| Symbols: DES-1-LIKE | fatty acid desaturase family protein | chr4:2509236-2510918 FORWARD LENGTH=332 |
| NR |
ref|XP_004976321.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
351 |
1 |
350 |
e-179 |
92.6 |
88 |
90.3 |
| Subject |
325 |
1 |
324 |
|
| Annot |
PREDICTED: sphingolipid delta(4)-desaturase DES1-like [Setaria italica] |
| IRGSP |
Os02t0639600-01_chr02_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
351 |
1 |
350 |
e-175 |
93.4 |
84.9 |
88.9 |
| Subject |
328 |
1 |
327 |
|
| Annot |
|
| Sbicolor |
Sobic.006G157100.1.p|Chr06|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
351 |
1 |
350 |
e-176 |
92.6 |
84.3 |
89.5 |
| Subject |
325 |
1 |
324 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00056.1.g03120.1.am.mk |
length: 351 aa. |
| IPR005804 |
Fatty acid desaturase, type 1 |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006629 |
lipid metabolic process |
|
|
| HMMPfam |
PF00487 |
FA_desaturase |
2.3e-24 |
101-315 |
| IPR011388 |
Sphingolipid delta4-desaturase |
| Biological Process |
GO:0006633 |
fatty acid biosynthetic process |
|
|
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| Molecular Function |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPIR |
PIRSF017228 |
Sphingolipid |
4.4e-203 |
1-351 |
| IPR013866 |
Sphingolipid delta4-desaturase, N-terminal |
| Biological Process |
GO:0006633 |
fatty acid biosynthetic process |
|
|
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| Molecular Function |
GO:0016705 |
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPfam |
PF08557 |
Lipid_DES |
2.1e-21 |
12-48 |
| no_ID |
|
| HMMPanther |
PTHR12879 |
SPHINGOLIPID |
1.9e-176 |
1-345 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 11 | 7120242 | 7122594 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00056.1 |
maker_non_over |
exon |
1230583 |
1230738 |
. |
+ |
. |
ID=Zjn_sc00056.1.g03120.1.am.mk:exon:1 |
| Zjn_sc00056.1 |
maker_non_over |
exon |
1230806 |
1230883 |
. |
+ |
. |
ID=Zjn_sc00056.1.g03120.1.am.mk:exon:2 |
| Zjn_sc00056.1 |
maker_non_over |
exon |
1232114 |
1232935 |
. |
+ |
. |
ID=Zjn_sc00056.1.g03120.1.am.mk:exon:3 |