Z. japonica Nagirizaki
Zjn_sc00056.1.g02570.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G37170.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 290 1 290 e-131 98.3 80.7 86.2
Subject 285 1 281
Annot | Symbols: PIP2B, PIP2;2 | plasma membrane intrinsic protein 2 | chr2:15613624-15614791 REVERSE LENGTH=285
NR ref|XP_004976254.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 290 1 290 e-152 100 92.1 95.5
Subject 290 1 290
Annot PREDICTED: aquaporin PIP2-5 [Setaria italica]
IRGSP Os02t0629200-02_chr02_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 290 1 287 e-147 99.3 87.2 92.1
Subject 288 1 286
Annot
Sbicolor Sobic.004G222000.1.p|Chr04|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 290 1 285 e-150 99.7 88.6 93.8
Subject 289 1 284
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00056.1.g02570.1.sm.mkhc length: 290 aa.
IPR000425 Major intrinsic protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00783 MINTRINSICP 8.8e-73 42-61
92-116
129-148
178-196
214-236
254-274
HMMPanther PTHR19139 AQUAPORIN 3.5e-195 10-282
HMMPfam PF00230 MIP 2.7e-85 34-271
HMMTigr TIGR00861 MIP: 5.1e-64 46-270
IPR022357 Major intrinsic protein, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
PatternScan PS00221 MIP NA 110-118
IPR023271 Aquaporin-like
Gene3D G3DSA:1.20.1080.10 no description 1.6e-92 12-285
superfamily SSF81338 Aquaporin-like 2.1e-61 31-275
no_ID  
HMMPanther PTHR19139:SF27 AQUAPORIN-RELATED 3.5e-195 10-282
Pseudomolecule
Chromosome Start End Strand
1169088726911133+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00056.1 maker exon 1019213 1019617 . + . ID=Zjn_sc00056.1.g02570.1.sm.mkhc:exon:1
Zjn_sc00056.1 maker exon 1019700 1019995 . + . ID=Zjn_sc00056.1.g02570.1.sm.mkhc:exon:2
Zjn_sc00056.1 maker exon 1020374 1020514 . + . ID=Zjn_sc00056.1.g02570.1.sm.mkhc:exon:3
Zjn_sc00056.1 maker exon 1021087 1021474 . + . ID=Zjn_sc00056.1.g02570.1.sm.mkhc:exon:4

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