Z. japonica Nagirizaki
Zjn_sc00056.1.g01060.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G20340.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 560 22 514 e-142 87.5 42.3 58.6
Subject 490 6 488
Annot | Symbols: | Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr2:8779804-8782490 FORWARD LENGTH=490
NR ref|XP_004979848.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 560 1 514 0.0 92.1 73.9 82.5
Subject 516 1 510
Annot PREDICTED: aromatic-L-amino-acid decarboxylase-like [Setaria italica]
IRGSP Os08t0140500-00_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 560 25 514 0.0 93.4 72.9 79.8
Subject 523 22 516
Annot
Sbicolor Sobic.007G035300.1.p|Chr07|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 560 1 514 0.0 93 74.5 81.3
Subject 521 1 512
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00056.1.g01060.1.am.mk length: 560 aa.
IPR002129 Pyridoxal phosphate-dependent decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0016831 carboxy-lyase activity    
Biological Process GO:0019752 carboxylic acid metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
HMMPfam PF00282 Pyridoxal_deC 6.3e-126 62-445
IPR010977 Aromatic-L-amino-acid decarboxylase
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0016831 carboxy-lyase activity    
FPrintScan PR00800 YHDCRBOXLASE 8.2e-51 33-52
56-73
74-93
100-119
121-139
140-159
383-398
426-445
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 4.9e-100 111-397
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 6.7e-34 398-513
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 5.3e-127 28-513
IPR021115 Pyridoxal-phosphate binding site
Molecular Function GO:0016831 carboxy-lyase activity    
PatternScan PS00392 DDC_GAD_HDC_YDC NA 327-348
no_ID  
Gene3D G3DSA:1.20.1340.10 no description 7.9e-25 28-108
HMMPanther PTHR11999 GROUP 7.2e-237 26-514
HMMPanther PTHR11999:SF11 AROMATIC 7.2e-237 26-514
Seg seg seg NA 112-124
141-155
162-179
182-197
281-293
336-345
504-515
Pseudomolecule
Chromosome Start End Strand
1162984646300146-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00056.1 maker_non_over exon 408805 410487 . - . ID=Zjn_sc00056.1.g01060.1.am.mk:exon:1

Top