Z. japonica Nagirizaki
Zjn_sc00056.1.g00950.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G65480.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 174 3 171 5e-72 100.6 69 81.6
Subject 175 6 174
Annot | Symbols: FT | PEBP (phosphatidylethanolamine-binding protein) family protein | chr1:24331510-24333689 FORWARD LENGTH=175
NR ref|XP_004976027.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 174 1 174 4e-96 100 97.1 99.4
Subject 174 1 174
Annot PREDICTED: protein FLOWERING LOCUS T-like [Setaria italica]
IRGSP Os04t0488400-01_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 174 1 174 2e-96 100 94.3 97.7
Subject 174 1 174
Annot
Sbicolor Sobic.006G128500.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 174 1 174 1e-96 100 94.8 97.7
Subject 174 1 174
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00056.1.g00950.1.am.mkhc length: 174 aa.
IPR001858 Phosphatidylethanolamine-binding, conserved site
method AccNumber shortName E-value location
PatternScan PS01220 PBP NA 62-84
IPR008914 Phosphatidylethanolamine-binding protein PEBP
Gene3D G3DSA:3.90.280.10 no description 3.2e-60 3-168
HMMPfam PF01161 PBP 5.7e-24 24-159
superfamily SSF49777 PEBP-like 8.2e-54 9-165
no_ID  
HMMPanther PTHR11362 PHOSPHATIDYLETHANOLAMINE-BINDING 2.7e-73 1-171
Pseudomolecule
Chromosome Start End Strand
1162418246243494+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00056.1 maker exon 352165 352411 . + . ID=Zjn_sc00056.1.g00950.1.am.mkhc:exon:1
Zjn_sc00056.1 maker exon 353147 353208 . + . ID=Zjn_sc00056.1.g00950.1.am.mkhc:exon:2
Zjn_sc00056.1 maker exon 353323 353363 . + . ID=Zjn_sc00056.1.g00950.1.am.mkhc:exon:3
Zjn_sc00056.1 maker exon 353442 353835 . + . ID=Zjn_sc00056.1.g00950.1.am.mkhc:exon:4

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