Z. japonica Nagirizaki
Zjn_sc00056.1.g00260.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G42260.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 395 2 388 e-119 128.4 53.7 70.1
Subject 507 93 497
Annot | Symbols: BGLU12 | beta glucosidase 12 | chr5:16898712-16900235 FORWARD LENGTH=507
NR sp|Q7XKV4.2|BGL12_ORYSJ Length Start End E-value Length(%) Iden(%) Posi(%)
Query 395 2 394 0.0 129.1 82.5 90.6
Subject 510 96 510
Annot RecName: Full=Beta-glucosidase 12; Short=Os4bglu12; Flags: Precursor gi|38344468|emb|CAE05483.2| OSJNBa0022H21.3 [Oryza sativa Japonica Group] gi|222629047|gb|EEE61179.1| hypothetical protein OsJ_15166 [Oryza sativa Japonica Group]
IRGSP Os04t0474900-01_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 395 2 394 0.0 128.1 80.3 88.6
Subject 506 92 506
Annot
Sbicolor Sobic.006G117100.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 395 2 394 0.0 129.6 79.7 88.6
Subject 512 98 512
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00056.1.g00260.1.sm.mkhc length: 395 aa.
IPR001360 Glycoside hydrolase, family 1
method AccNumber shortName E-value location
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
FPrintScan PR00131 GLHYDRLASE1 7.9e-25 217-231
296-304
319-330
340-357
364-376
HMMPanther PTHR10353 GLYCOSYL 1e-231 2-393
HMMPfam PF00232 Glyco_hydro_1 6.7e-115 2-28
29-393
IPR013781 Glycoside hydrolase, catalytic domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Gene3D G3DSA:3.20.20.80 no description 2.6e-165 2-393
IPR017853 Glycoside hydrolase, superfamily
superfamily SSF51445 (Trans)glycosidases 1.7e-144 1-394
Pseudomolecule
Chromosome Start End Strand
1159934085996856-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00056.1 maker exon 103749 104137 . - . ID=Zjn_sc00056.1.g00260.1.sm.mkhc:exon:8
Zjn_sc00056.1 maker exon 104299 104407 . - . ID=Zjn_sc00056.1.g00260.1.sm.mkhc:exon:7
Zjn_sc00056.1 maker exon 104618 104720 . - . ID=Zjn_sc00056.1.g00260.1.sm.mkhc:exon:6
Zjn_sc00056.1 maker exon 104970 105228 . - . ID=Zjn_sc00056.1.g00260.1.sm.mkhc:exon:5
Zjn_sc00056.1 maker exon 105330 105445 . - . ID=Zjn_sc00056.1.g00260.1.sm.mkhc:exon:4
Zjn_sc00056.1 maker exon 105544 105799 . - . ID=Zjn_sc00056.1.g00260.1.sm.mkhc:exon:3
Zjn_sc00056.1 maker exon 106271 106358 . - . ID=Zjn_sc00056.1.g00260.1.sm.mkhc:exon:2
Zjn_sc00056.1 maker exon 106744 107197 . - . ID=Zjn_sc00056.1.g00260.1.sm.mkhc:exon:1

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