Z. japonica Nagirizaki
Zjn_sc00054.1.g00730.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G13080.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 192 89 180 3e-44 75.5 41.1 43.8
Subject 145 54 145
Annot | Symbols: WRKY75, ATWRKY75 | WRKY DNA-binding protein 75 | chr5:4149928-4151019 REVERSE LENGTH=145
NR ref|XP_004979296.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 192 4 191 3e-67 107.8 78.1 82.8
Subject 207 3 206
Annot PREDICTED: probable WRKY transcription factor 75 [Setaria italica]
IRGSP Os11t0490900-01_chr11_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 192 7 180 2e-54 126 62 68.2
Subject 242 5 215
Annot
Sbicolor Sobic.005G117400.2.p|Chr05|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 192 57 189 2e-60 117.2 59.9 62.5
Subject 225 92 220
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00054.1.g00730.1.sm.mkhc length: 192 aa.
IPR003657 DNA-binding WRKY
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
Gene3D G3DSA:2.20.25.80 no description 9.3e-34 86-159
HMMPfam PF03106 WRKY 7.1e-31 101-159
HMMSmart SM00774 DNA 1e-39 101-160
ProfileScan PS50811 WRKY 30.079 96-161
superfamily SSF118290 WRKY 2.2e-29 92-162
no_ID  
HMMPanther PTHR31221 FAMILY 9.9e-36 86-160
Seg seg seg NA 59-73
77-87
178-189
Pseudomolecule
Chromosome Start End Strand
945170174520456+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00054.1 maker exon 749074 749876 . - . ID=Zjn_sc00054.1.g00730.1.sm.mkhc:exon:2
Zjn_sc00054.1 maker exon 751989 752513 . - . ID=Zjn_sc00054.1.g00730.1.sm.mkhc:exon:1

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