Z. japonica Nagirizaki
Zjn_sc00053.1.g02180.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G57660.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 286 61 274 1e-17 124.1 25.2 34.6
Subject 355 157 346
Annot | Symbols: ATCOL5, COL5 | CONSTANS-like 5 | chr5:23355573-23356729 FORWARD LENGTH=355
NR ref|XP_002464933.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 286 9 286 1e-74 104.2 75.2 79.4
Subject 298 10 298
Annot hypothetical protein SORBIDRAFT_01g029080 [Sorghum bicolor] gi|241918787|gb|EER91931.1| hypothetical protein SORBIDRAFT_01g029080 [Sorghum bicolor]
IRGSP Os10t0560400-01_chr10_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 286 37 286 1e-57 103.8 58.7 62.2
Subject 297 39 297
Annot
Sbicolor Sobic.001G298400.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 286 9 286 1e-77 104.2 75.2 79.4
Subject 298 10 298
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00053.1.g02180.1.am.mk length: 286 aa.
IPR010402 CCT domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF06203 CCT 1.9e-19 213-256
ProfileScan PS51017 CCT 16.222 213-255
no_ID  
HMMPanther PTHR31319 FAMILY 9.6e-27 189-274
Seg seg seg NA 2-30
57-75
104-115
152-167
219-231
262-272
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00053.1 maker_non_over exon 1301330 1301656 . - . ID=Zjn_sc00053.1.g02180.1.am.mk:exon:2
Zjn_sc00053.1 maker_non_over exon 1303189 1303722 . - . ID=Zjn_sc00053.1.g02180.1.am.mk:exon:1

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