Z. japonica Nagirizaki
Zjn_sc00053.1.g01680.1.am.mkhc
Sequence
-
BLAST
| TAIR10 |
AT4G12430.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
277 |
97 |
272 |
6e-62 |
132.9 |
44 |
50.5 |
| Subject |
368 |
155 |
358 |
|
| Annot |
| Symbols: TPPF | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr4:7365480-7367346 REVERSE LENGTH=368 |
| NR |
ref|XP_004983712.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
277 |
97 |
277 |
4e-90 |
137.5 |
61 |
63.2 |
| Subject |
381 |
167 |
381 |
|
| Annot |
PREDICTED: probable trehalose-phosphate phosphatase 2 [Setaria italica] gi|514818003|ref|XP_004983713.1| PREDICTED: probable trehalose-phosphate phosphatase 2 [Setaria italica] |
| IRGSP |
Os10t0553300-01_chr10_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
277 |
1 |
277 |
3e-85 |
137.9 |
69.3 |
81.6 |
| Subject |
382 |
1 |
382 |
|
| Annot |
|
| Sbicolor |
Sobic.001G303900.1.p|Chr01|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
277 |
97 |
277 |
1e-90 |
137.9 |
59.6 |
62.1 |
| Subject |
382 |
168 |
382 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00053.1.g01680.1.am.mkhc |
length: 277 aa. |
| IPR003337 |
Trehalose-phosphatase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005992 |
trehalose biosynthetic process |
|
|
| HMMPfam |
PF02358 |
Trehalose_PPase |
6.1e-26 |
160-260 |
| HMMTigr |
TIGR00685 |
T6PP: |
3.8e-20 |
165-270 |
| IPR023214 |
HAD-like domain |
| Gene3D |
G3DSA:3.40.50.1000 |
no description |
2.6e-29 |
183-275 |
| superfamily |
SSF56784 |
HAD-like |
2.6e-17 |
96-277 |
| no_ID |
|
| HMMPanther |
PTHR10788 |
TREHALOSE-6-PHOSPHATE |
3.4e-55 |
96-275 |
| Seg |
seg |
seg |
NA |
27-37 |
Pseudomolecule
No data.
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00053.1 |
maker |
exon |
976793 |
977586 |
. |
- |
. |
ID=Zjn_sc00053.1.g01680.1.am.mkhc:exon:8 |
| Zjn_sc00053.1 |
maker |
exon |
977695 |
977787 |
. |
- |
. |
ID=Zjn_sc00053.1.g01680.1.am.mkhc:exon:7 |
| Zjn_sc00053.1 |
maker |
exon |
977874 |
978014 |
. |
- |
. |
ID=Zjn_sc00053.1.g01680.1.am.mkhc:exon:6 |
| Zjn_sc00053.1 |
maker |
exon |
978108 |
978185 |
. |
- |
. |
ID=Zjn_sc00053.1.g01680.1.am.mkhc:exon:5 |
| Zjn_sc00053.1 |
maker |
exon |
978477 |
978533 |
. |
- |
. |
ID=Zjn_sc00053.1.g01680.1.am.mkhc:exon:4 |
| Zjn_sc00053.1 |
maker |
exon |
978617 |
978742 |
. |
- |
. |
ID=Zjn_sc00053.1.g01680.1.am.mkhc:exon:3 |
| Zjn_sc00053.1 |
maker |
exon |
979221 |
979703 |
. |
- |
. |
ID=Zjn_sc00053.1.g01680.1.am.mkhc:exon:2 |
| Zjn_sc00053.1 |
maker |
exon |
981167 |
981272 |
. |
- |
. |
ID=Zjn_sc00053.1.g01680.1.am.mkhc:exon:1 |