Z. japonica Nagirizaki
Zjn_sc00053.1.g00410.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G42010.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 954 33 814 0.0 113.5 49.1 59.5
Subject 1083 67 915
Annot | Symbols: PLDBETA1, PLDBETA | phospholipase D beta 1 | chr2:17533018-17537990 REVERSE LENGTH=1083
NR ref|XP_004983867.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 954 38 885 0.0 109.4 73 78.5
Subject 1044 40 1015
Annot PREDICTED: phospholipase D gamma 1-like [Setaria italica]
IRGSP Os10t0524400-03_chr10_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 954 46 885 0.0 109.6 67.4 74.1
Subject 1046 43 1017
Annot
Sbicolor Sobic.001G320200.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 954 47 885 0.0 110.4 71.4 77.6
Subject 1053 54 1024
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00053.1.g00410.1.sm.mkhc length: 954 aa.
IPR000008 C2 calcium-dependent membrane targeting
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00168 C2 9.5e-22 223-326
HMMSmart SM00239 Protein 4.3e-16 222-342
IPR001736 Phospholipase D/Transphosphatidylase
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF00614 PLDc 2.4e-11 542-577
ProfileScan PS50035 PLD 10.710 542-577
IPR008973 C2 calcium/lipid-binding domain, CaLB
Molecular Function GO:0005515 protein binding    
superfamily SSF49562 C2 2.1e-26 212-373
IPR015679 Phospholipase D family
HMMPanther PTHR18896 PHOSPHOLIPASE 0 18-885
IPR018029 C2 membrane targeting protein
ProfileScan PS50004 C2 11.167 218-327
IPR024632 Phospholipase D, C-terminal
HMMPfam PF12357 PLD_C 2.9e-21 834-887
no_ID  
Gene3D G3DSA:2.60.40.150 no description 2.9e-22 220-368
Gene3D G3DSA:3.30.870.10 no description 6.4e-17 430-642
HMMPanther PTHR18896:SF15 PHOSPHOLIPASE 0 18-885
Seg seg seg NA 4-66
69-113
116-126
133-154
171-184
190-209
804-815
918-927
942-950
superfamily SSF56024 Phospholipase 1.5e-08 386-640
645-778
Pseudomolecule
No data.
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00053.1 maker exon 228556 228662 . - . ID=Zjn_sc00053.1.g00410.1.sm.mkhc:exon:10
Zjn_sc00053.1 maker exon 228763 228865 . - . ID=Zjn_sc00053.1.g00410.1.sm.mkhc:exon:9
Zjn_sc00053.1 maker exon 229900 230100 . - . ID=Zjn_sc00053.1.g00410.1.sm.mkhc:exon:8
Zjn_sc00053.1 maker exon 231184 231354 . - . ID=Zjn_sc00053.1.g00410.1.sm.mkhc:exon:7
Zjn_sc00053.1 maker exon 231738 231890 . - . ID=Zjn_sc00053.1.g00410.1.sm.mkhc:exon:6
Zjn_sc00053.1 maker exon 231969 232037 . - . ID=Zjn_sc00053.1.g00410.1.sm.mkhc:exon:5
Zjn_sc00053.1 maker exon 232122 232370 . - . ID=Zjn_sc00053.1.g00410.1.sm.mkhc:exon:4
Zjn_sc00053.1 maker exon 232555 232749 . - . ID=Zjn_sc00053.1.g00410.1.sm.mkhc:exon:3
Zjn_sc00053.1 maker exon 232944 233060 . - . ID=Zjn_sc00053.1.g00410.1.sm.mkhc:exon:2
Zjn_sc00053.1 maker exon 233514 235010 . - . ID=Zjn_sc00053.1.g00410.1.sm.mkhc:exon:1

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