| TAIR10 | AT5G66760.1 | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
|---|---|---|---|---|---|---|---|---|---|
| Query | 608 | 1 | 608 | 0.0 | 104.3 | 90.8 | 96.2 | ||
| Subject | 634 | 1 | 634 | ||||||
| Annot | | Symbols: SDH1-1 | succinate dehydrogenase 1-1 | chr5:26653776-26657224 FORWARD LENGTH=634 | ||||||||
| NR | ref|NP_001146352.1| | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
| Query | 608 | 1 | 608 | 0.0 | 101.8 | 96.7 | 98.8 | ||
| Subject | 619 | 1 | 619 | ||||||
| Annot | uncharacterized protein LOC100279930 [Zea mays] gi|219886761|gb|ACL53755.1| unknown [Zea mays] gi|224034159|gb|ACN36155.1| unknown [Zea mays] gi|224034161|gb|ACN36156.1| unknown [Zea mays] gi|414883483|tpg|DAA59497.1| TPA: succinate dehydrogenase flavoprotein subunit [Zea mays] | ||||||||
| IRGSP | Os07t0134800-01_chr07_irgsp1_locus | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
| Query | 608 | 1 | 608 | 0.0 | 103.6 | 94.9 | 98 | ||
| Subject | 630 | 1 | 630 | ||||||
| Annot | |||||||||
| Sbicolor | Sobic.002G028700.1.p|Chr02|gene | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
| Query | 608 | 1 | 608 | 0.0 | 101.8 | 96.9 | 98.8 | ||
| Subject | 619 | 1 | 619 | ||||||
| Annot | |||||||||
| Zjn_sc00051.1.g02560.1.sm.mkhc | length: 608 aa. | |||
| IPR003952 | Fumarate reductase/succinate dehydrogenase, FAD-binding site | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0016491 | oxidoreductase activity | ||
| Biological Process | GO:0055114 | oxidation-reduction process | ||
| PatternScan | PS00504 | FRD_SDH_FAD_BINDING | NA | 70-79 |
| IPR003953 | FAD binding domain | |||
| HMMPfam | PF00890 | FAD_binding_2 | 6.7e-125 | 36-432 |
| IPR011281 | Succinate dehydrogenase, flavoprotein subunit | |||
| Biological Process | GO:0006099 | tricarboxylic acid cycle | ||
| Molecular Function | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | ||
| Molecular Function | GO:0050660 | flavin adenine dinucleotide binding | ||
| Biological Process | GO:0055114 | oxidation-reduction process | ||
| HMMTigr | TIGR01816 | sdhA_forward: | 6.5e-290 | 33-608 |
| IPR014006 | Succinate dehydrogenase/fumarate reductase, flavoprotein subunit | |||
| Molecular Function | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | ||
| Biological Process | GO:0022900 | electron transport chain | ||
| Molecular Function | GO:0050660 | flavin adenine dinucleotide binding | ||
| Biological Process | GO:0055114 | oxidation-reduction process | ||
| HMMPanther | PTHR11632:SF5 | SUCCINATE | 0 | 1-608 |
| HMMTigr | TIGR01812 | sdhA_frdA_Gneg: | 1.5e-235 | 36-608 |
| IPR015939 | Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal | |||
| Molecular Function | GO:0016491 | oxidoreductase activity | ||
| Biological Process | GO:0055114 | oxidation-reduction process | ||
| Gene3D | G3DSA:1.20.58.100 | no description | 4.7e-37 | 449-554 |
| HMMPfam | PF02910 | Succ_DH_flav_C | 2.6e-47 | 476-608 |
| superfamily | SSF46977 | Succinate | 4.7e-53 | 467-608 |
| IPR027477 | Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain | |||
| Gene3D | G3DSA:3.90.700.10 | no description | 4.7e-42 | 271-376 |
| superfamily | SSF56425 | Succinate | 5.1e-63 | 264-382 |
| no_ID | ||||
| Gene3D | G3DSA:3.50.50.60 | no description | 3.5e-128 | 377-442 |
| Gene3D | G3DSA:4.10.80.40 | no description | 8.1e-28 | 555-608 |
| HMMPanther | PTHR11632 | SUCCINATE | 0 | 1-608 |
| Seg | seg | seg | NA | 7-29 37-52 526-538 |
| superfamily | SSF51905 | FAD/NAD(P)-binding | 5.9e-81 | 14-440 |
| scaffold | source | type | start | end | score | strand | phase | attributes |
|---|---|---|---|---|---|---|---|---|
| Zjn_sc00051.1 | maker | exon | 1646815 | 1646889 | . | + | . | ID=Zjn_sc00051.1.g02560.1.sm.mkhc:exon:1 |
| Zjn_sc00051.1 | maker | exon | 1647077 | 1647232 | . | + | . | ID=Zjn_sc00051.1.g02560.1.sm.mkhc:exon:2 |
| Zjn_sc00051.1 | maker | exon | 1647323 | 1647410 | . | + | . | ID=Zjn_sc00051.1.g02560.1.sm.mkhc:exon:3 |
| Zjn_sc00051.1 | maker | exon | 1647607 | 1647753 | . | + | . | ID=Zjn_sc00051.1.g02560.1.sm.mkhc:exon:4 |
| Zjn_sc00051.1 | maker | exon | 1647862 | 1648002 | . | + | . | ID=Zjn_sc00051.1.g02560.1.sm.mkhc:exon:5 |
| Zjn_sc00051.1 | maker | exon | 1648251 | 1648336 | . | + | . | ID=Zjn_sc00051.1.g02560.1.sm.mkhc:exon:6 |
| Zjn_sc00051.1 | maker | exon | 1648429 | 1648521 | . | + | . | ID=Zjn_sc00051.1.g02560.1.sm.mkhc:exon:7 |
| Zjn_sc00051.1 | maker | exon | 1648645 | 1648708 | . | + | . | ID=Zjn_sc00051.1.g02560.1.sm.mkhc:exon:8 |
| Zjn_sc00051.1 | maker | exon | 1648843 | 1648986 | . | + | . | ID=Zjn_sc00051.1.g02560.1.sm.mkhc:exon:9 |
| Zjn_sc00051.1 | maker | exon | 1649066 | 1649253 | . | + | . | ID=Zjn_sc00051.1.g02560.1.sm.mkhc:exon:10 |
| Zjn_sc00051.1 | maker | exon | 1649336 | 1649477 | . | + | . | ID=Zjn_sc00051.1.g02560.1.sm.mkhc:exon:11 |
| Zjn_sc00051.1 | maker | exon | 1649604 | 1649774 | . | + | . | ID=Zjn_sc00051.1.g02560.1.sm.mkhc:exon:12 |
| Zjn_sc00051.1 | maker | exon | 1649980 | 1650049 | . | + | . | ID=Zjn_sc00051.1.g02560.1.sm.mkhc:exon:13 |
| Zjn_sc00051.1 | maker | exon | 1650142 | 1650262 | . | + | . | ID=Zjn_sc00051.1.g02560.1.sm.mkhc:exon:14 |
| Zjn_sc00051.1 | maker | exon | 1650353 | 1650390 | . | + | . | ID=Zjn_sc00051.1.g02560.1.sm.mkhc:exon:15 |
| Zjn_sc00051.1 | maker | exon | 1650621 | 1651082 | . | + | . | ID=Zjn_sc00051.1.g02560.1.sm.mkhc:exon:16 |