Z. japonica Nagirizaki
Zjn_sc00051.1.g01260.1.am.mkhc ( /TE )
Sequence
-
BLAST
| TAIR10 |
AT3G04790.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
431 |
191 |
431 |
e-103 |
64 |
42.5 |
49 |
| Subject |
276 |
35 |
276 |
|
| Annot |
| Symbols: | Ribose 5-phosphate isomerase, type A protein | chr3:1313365-1314195 FORWARD LENGTH=276 |
| NR |
ref|NP_001151138.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
431 |
157 |
431 |
e-129 |
63.6 |
57.8 |
60.3 |
| Subject |
274 |
1 |
274 |
|
| Annot |
LOC100284771 [Zea mays] gi|195634641|gb|ACG36789.1| ribose-5-phosphate isomerase [Zea mays] gi|195635347|gb|ACG37142.1| ribose-5-phosphate isomerase [Zea mays] gi|195641308|gb|ACG40122.1| ribose-5-phosphate isomerase [Zea mays] gi|195644532|gb|ACG41734.1| ribose-5-phosphate isomerase [Zea mays] gi|224030977|gb|ACN34564.1| unknown [Zea mays] gi|414883731|tpg|DAA59745.1| TPA: Ribose-5-phosphate isomerase [Zea mays] |
| IRGSP |
Os07t0176900-01_chr07_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
431 |
157 |
431 |
e-130 |
65 |
57.5 |
60.3 |
| Subject |
280 |
1 |
280 |
|
| Annot |
|
| Sbicolor |
Sobic.002G051100.2.p|Chr02|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
431 |
157 |
431 |
e-134 |
63.8 |
58 |
60.1 |
| Subject |
275 |
1 |
275 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00051.1.g01260.1.am.mkhc |
length: 431 aa. |
| IPR004788 |
Ribose 5-phosphate isomerase, type A |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004751 |
ribose-5-phosphate isomerase activity |
|
|
| Biological Process |
GO:0009052 |
pentose-phosphate shunt, non-oxidative branch |
|
|
| HMMPanther |
PTHR11934 |
RIBOSE-5-PHOSPHATE |
7.5e-119 |
162-431 |
| HMMPfam |
PF06026 |
Rib_5-P_isom_A |
2.3e-64 |
249-426 |
| HMMTigr |
TIGR00021 |
rpiA: |
5.7e-76 |
204-426 |
| IPR005345 |
PHF5-like |
| HMMPfam |
PF03660 |
PHF5 |
5.2e-47 |
1-105 |
| IPR020672 |
Ribose-5-phosphate isomerase, type A, subgroup |
| Molecular Function |
GO:0004751 |
ribose-5-phosphate isomerase activity |
|
|
| Biological Process |
GO:0009052 |
pentose-phosphate shunt, non-oxidative branch |
|
|
| HAMAP |
MF_00170 |
Rib_5P_isom_A |
29.976 |
201-429 |
| no_ID |
|
| Gene3D |
G3DSA:3.30.70.260 |
no description |
1.7e-19 |
344-409 |
| Gene3D |
G3DSA:3.40.50.1360 |
no description |
9.2e-56 |
203-343 |
| HMMPanther |
PTHR11934:SF0 |
SUBFAMILY |
7.5e-119 |
162-431 |
| Seg |
seg |
seg |
NA |
185-198 |
| superfamily |
SSF100950 |
NagB/RpiA/CoA |
1.7e-41 |
199-350 |
| superfamily |
SSF75445 |
D-ribose-5-phosphate |
2.1e-19 |
331-409 |
Pseudomolecule
No data.
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00051.1 |
maker |
exon |
909237 |
909547 |
. |
+ |
. |
ID=Zjn_sc00051.1.g01260.1.am.mkhc:exon:1 |
| Zjn_sc00051.1 |
maker |
exon |
910345 |
910894 |
. |
+ |
. |
ID=Zjn_sc00051.1.g01260.1.am.mkhc:exon:2 |
| Zjn_sc00051.1 |
maker |
exon |
911770 |
915093 |
. |
+ |
. |
ID=Zjn_sc00051.1.g01260.1.am.mkhc:exon:3 |