Z. japonica Nagirizaki
Zjn_sc00050.1.g02700.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G33100.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1090 63 1090 0.0 95 66.2 76.1
Subject 1036 14 1036
Annot | Symbols: ATCSLD1, CSLD1 | cellulose synthase-like D1 | chr2:14036494-14040044 REVERSE LENGTH=1036
NR ref|XP_002438429.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1090 68 1090 0.0 97 84.3 87.5
Subject 1057 10 1057
Annot hypothetical protein SORBIDRAFT_10g019350 [Sorghum bicolor] gi|241916652|gb|EER89796.1| hypothetical protein SORBIDRAFT_10g019350 [Sorghum bicolor]
IRGSP Os06t0336500-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1090 101 1090 0.0 92.8 81 84.7
Subject 1012 1 1012
Annot
Sbicolor Sobic.010G146000.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1090 68 1090 0.0 97 84.3 87.5
Subject 1057 10 1057
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00050.1.g02700.1.am.mk length: 1090 aa.
IPR005150 Cellulose synthase
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Molecular Function GO:0016760 cellulose synthase (UDP-forming) activity    
Biological Process GO:0030244 cellulose biosynthetic process    
HMMPfam PF03552 Cellulose_synt 2.4e-183 346-705
706-1084
no_ID  
HMMPanther PTHR32287 FAMILY 0 101-1090
HMMPanther PTHR32287:SF5 SUBFAMILY 0 101-1090
Seg seg seg NA 122-149
158-171
221-232
262-276
704-712
746-759
905-921
971-980
995-1011
superfamily SSF53448 Nucleotide-diphospho-sugar 8.9e-07 341-887
Pseudomolecule
Chromosome Start End Strand
2087005588703936+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00050.1 maker_non_over exon 1625911 1626080 . + . ID=Zjn_sc00050.1.g02700.1.am.mk:exon:1
Zjn_sc00050.1 maker_non_over exon 1626110 1626724 . + . ID=Zjn_sc00050.1.g02700.1.am.mk:exon:2
Zjn_sc00050.1 maker_non_over exon 1626802 1629289 . + . ID=Zjn_sc00050.1.g02700.1.am.mk:exon:3

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