Z. japonica Nagirizaki
Zjn_sc00050.1.g01930.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G11820.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 202 4 85 2e-37 228.2 34.2 37.1
Subject 461 3 84
Annot | Symbols: MVA1, FKP1 | hydroxymethylglutaryl-CoA synthase / HMG-CoA synthase / 3-hydroxy-3-methylglutaryl coenzyme A synthase | chr4:7109124-7111901 REVERSE LENGTH=461
NR gb|EMS54524.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 202 86 202 5e-43 207.4 48 52.5
Subject 419 257 419
Annot Hydroxymethylglutaryl-CoA synthase [Triticum urartu]
IRGSP Os09t0521400-01_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 202 3 85 3e-42 235.6 39.6 40.1
Subject 476 4 86
Annot
Sbicolor Sobic.002G268700.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 202 1 85 2e-43 232.7 39.6 41.1
Subject 470 1 85
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00050.1.g01930.1.sm.mkhc length: 202 aa.
IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0004421 hydroxymethylglutaryl-CoA synthase activity    
Biological Process GO:0008299 isoprenoid biosynthetic process    
HMMPfam PF01154 HMG_CoA_synt_N 3.3e-28 4-85
IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal
Molecular Function GO:0004421 hydroxymethylglutaryl-CoA synthase activity    
Biological Process GO:0008299 isoprenoid biosynthetic process    
HMMPfam PF08540 HMG_CoA_synt_C 3e-14 85-131
132-182
IPR016038 Thiolase-like, subgroup
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.47.10 no description 4.6e-27 4-86
IPR016039 Thiolase-like
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF53901 Thiolase-like 1.1e-06 5-85
133-182
no_ID  
HMMPanther PTHR11877 HYDROXYMETHYLGLUTARYL-COA 1.2e-43 1-85
HMMPanther PTHR11877:SF10 SUBFAMILY 1.2e-43 1-85
Pseudomolecule
Chromosome Start End Strand
2082244388232643-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00050.1 maker exon 1149791 1154761 . - . ID=Zjn_sc00050.1.g01930.1.sm.mkhc:exon:6
Zjn_sc00050.1 maker exon 1155322 1155409 . - . ID=Zjn_sc00050.1.g01930.1.sm.mkhc:exon:5
Zjn_sc00050.1 maker exon 1155591 1155637 . - . ID=Zjn_sc00050.1.g01930.1.sm.mkhc:exon:4
Zjn_sc00050.1 maker exon 1157087 1157168 . - . ID=Zjn_sc00050.1.g01930.1.sm.mkhc:exon:3
Zjn_sc00050.1 maker exon 1157320 1157426 . - . ID=Zjn_sc00050.1.g01930.1.sm.mkhc:exon:2
Zjn_sc00050.1 maker exon 1157931 1157996 . - . ID=Zjn_sc00050.1.g01930.1.sm.mkhc:exon:1

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