Z. japonica Nagirizaki
Zjn_sc00050.1.g01100.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 No_hits
NR dbj|BAJ99170.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 354 105 334 2e-91 115.3 50.8 55.6
Subject 408 77 316
Annot predicted protein [Hordeum vulgare subsp. vulgare]
IRGSP Os09t0543400-00_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 354 105 334 6e-87 120.9 50 56.5
Subject 428 92 331
Annot
Sbicolor Sobic.002G282800.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 354 104 334 2e-95 116.7 51.4 57.1
Subject 413 80 321
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00050.1.g01100.1.am.mk length: 354 aa.
IPR000183 Ornithine/DAP/Arg decarboxylase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
FPrintScan PR01179 ODADCRBXLASE 1.7e-16 105-123
125-137
298-317
IPR002433 Ornithine decarboxylase
Biological Process GO:0006596 polyamine biosynthetic process    
FPrintScan PR01182 ORNDCRBXLASE 5.9e-30 103-130
147-171
177-199
IPR009006 Alanine racemase/group IV decarboxylase, C-terminal
Molecular Function GO:0003824 catalytic activity    
Gene3D G3DSA:2.40.37.10 no description 5.7e-09 293-334
IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal
Molecular Function GO:0003824 catalytic activity    
HMMPfam PF02784 Orn_Arg_deC_N 1.5e-43 97-308
IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site
PatternScan PS00879 ODR_DC_2_2 NA 253-270
no_ID  
Gene3D G3DSA:3.20.20.10 no description 2.1e-52 97-292
HMMPanther PTHR11482 ARGININE/DIAMINOPIMELATE/ORNITHINE 1.6e-130 104-334
HMMPanther PTHR11482:SF29 SUBFAMILY 1.6e-130 104-334
Seg seg seg NA 72-86
91-103
113-125
superfamily SSF51419 PLP-binding 4.3e-43 83-310
Pseudomolecule
Chromosome Start End Strand
2077782037784065+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00050.1 maker_non_over exon 703556 703722 . + . ID=Zjn_sc00050.1.g01100.1.am.mk:exon:1
Zjn_sc00050.1 maker_non_over exon 708492 709014 . + . ID=Zjn_sc00050.1.g01100.1.am.mk:exon:2
Zjn_sc00050.1 maker_non_over exon 709044 709418 . + . ID=Zjn_sc00050.1.g01100.1.am.mk:exon:3

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