Z. japonica Nagirizaki
Zjn_sc00050.1.g00530.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G66120.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 257 11 145 3e-62 172 43.2 47.9
Subject 442 79 213
Annot | Symbols: | 3-dehydroquinate synthase, putative | chr5:26431516-26433649 REVERSE LENGTH=442
NR ref|XP_004957492.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 257 1 145 1e-74 170.4 52.1 54.9
Subject 438 65 209
Annot PREDICTED: 3-dehydroquinate synthase, chloroplastic [Setaria italica]
IRGSP Os09t0539100-01_chr09_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 257 8 145 4e-73 172.4 50.6 52.1
Subject 443 77 214
Annot
Sbicolor Sobic.002G279700.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 257 1 145 2e-77 170.4 52.9 54.5
Subject 438 65 209
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00050.1.g00530.1.sm.mkhc length: 257 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:1.20.1090.10 no description 5.2e-25 145-251
Gene3D G3DSA:3.40.50.1970 no description 2.3e-43 12-144
HMMPanther PTHR21090 AROM/DEHYDROQUINATE 9.9e-80 4-254
HMMPfam PF01761 DHQ_synthase 5e-25 78-145
Seg seg seg NA 222-234
superfamily SSF56796 Dehydroquinate 5.8e-20 11-145
146-251
Pseudomolecule
Chromosome Start End Strand
2073931877396588+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00050.1 maker exon 318540 318655 . + . ID=Zjn_sc00050.1.g00530.1.sm.mkhc:exon:1
Zjn_sc00050.1 maker exon 318733 318883 . + . ID=Zjn_sc00050.1.g00530.1.sm.mkhc:exon:2
Zjn_sc00050.1 maker exon 318964 319131 . + . ID=Zjn_sc00050.1.g00530.1.sm.mkhc:exon:3
Zjn_sc00050.1 maker exon 320558 320620 . + . ID=Zjn_sc00050.1.g00530.1.sm.mkhc:exon:4
Zjn_sc00050.1 maker exon 320710 320853 . + . ID=Zjn_sc00050.1.g00530.1.sm.mkhc:exon:5
Zjn_sc00050.1 maker exon 321031 321941 . + . ID=Zjn_sc00050.1.g00530.1.sm.mkhc:exon:6

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