Z. japonica Nagirizaki
Zjn_sc00049.1.g03620.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G36270.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 335 11 322 2e-43 131.9 45.4 57
Subject 442 36 434
Annot | Symbols: ABI5, GIA1 | Basic-leucine zipper (bZIP) transcription factor family protein | chr2:15204980-15206571 REVERSE LENGTH=442
NR ref|XP_004964902.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 335 12 326 e-123 97 76.1 80.3
Subject 325 1 325
Annot PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 5 [Setaria italica]
IRGSP Os06t0211200-02_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 335 1 325 e-105 96.7 66.9 75.5
Subject 324 1 323
Annot
Sbicolor Sobic.010G081800.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 335 1 326 e-121 103.9 78.2 84.5
Subject 348 1 348
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00049.1.g03620.1.sm.mkhc length: 335 aa.
IPR004827 Basic-leucine zipper domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00170 bZIP_1 3.4e-13 246-296
HMMSmart SM00338 basic 1.7e-12 242-308
PatternScan PS00036 BZIP_BASIC NA 249-264
ProfileScan PS50217 BZIP 11.737 244-296
no_ID  
Coil coil coiled-coil NA 262-304
Gene3D G3DSA:1.20.5.170 no description 6.3e-14 246-296
HMMPanther PTHR22952 CAMP-RESPONSE 2.1e-151 12-322
HMMPanther PTHR22952:SF57 TGA4 2.1e-151 12-322
Seg seg seg NA 51-69
112-125
194-209
278-300
Pseudomolecule
Chromosome Start End Strand
2015072681511541+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00049.1 maker exon 1507268 1508065 . + . ID=Zjn_sc00049.1.g03620.1.sm.mkhc:exon:1
Zjn_sc00049.1 maker exon 1508696 1508767 . + . ID=Zjn_sc00049.1.g03620.1.sm.mkhc:exon:2
Zjn_sc00049.1 maker exon 1509400 1509429 . + . ID=Zjn_sc00049.1.g03620.1.sm.mkhc:exon:3
Zjn_sc00049.1 maker exon 1510736 1510812 . + . ID=Zjn_sc00049.1.g03620.1.sm.mkhc:exon:4
Zjn_sc00049.1 maker exon 1511511 1511541 . + . ID=Zjn_sc00049.1.g03620.1.sm.mkhc:exon:5

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