Z. japonica Nagirizaki
Zjn_sc00049.1.g02800.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G43190.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 770 5 770 0.0 104.9 74.8 86.2
Subject 808 8 807
Annot | Symbols: SUS4, ATSUS4 | sucrose synthase 4 | chr3:15179204-15182577 REVERSE LENGTH=808
NR ref|XP_006655877.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 770 1 770 0.0 104.9 93.6 97.5
Subject 808 1 802
Annot PREDICTED: sucrose synthase 2-like [Oryza brachyantha]
IRGSP Os06t0194900-03_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 770 1 770 0.0 104.9 92.9 96.8
Subject 808 1 802
Annot
Sbicolor Sobic.010G072300.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 770 1 770 0.0 104.2 94.7 97.9
Subject 802 1 802
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00049.1.g02800.1.am.mkhc length: 770 aa.
IPR000368 Sucrose synthase
method AccNumber shortName E-value location
Biological Process GO:0005985 sucrose metabolic process    
HMMPfam PF00862 Sucrose_synth 3e-142 6-300
300-519
IPR001296 Glycosyl transferase, family 1
Biological Process GO:0009058 biosynthetic process    
HMMPfam PF00534 Glycos_transf_1 1.2e-33 524-704
IPR012820 Sucrose synthase, plant/cyanobacteria
Biological Process GO:0005985 sucrose metabolic process    
Molecular Function GO:0016157 sucrose synthase activity    
HMMPanther PTHR12526:SF27 SUCROSE 0 129-762
HMMTigr TIGR02470 sucr_synth: 8.7e-274 300-767
no_ID  
Gene3D G3DSA:3.40.50.2000 no description 7.1e-17 526-710
HMMPanther PTHR12526 GLYCOSYLTRANSFERASE 0 129-762
Seg seg seg NA 99-113
245-263
superfamily SSF53756 UDP-Glycosyltransferase/glycogen 1.6e-45 279-728
Pseudomolecule
Chromosome Start End Strand
2011219691129186-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00049.1 maker exon 1121969 1122774 . - . ID=Zjn_sc00049.1.g02800.1.am.mkhc:exon:15
Zjn_sc00049.1 maker exon 1122878 1123016 . - . ID=Zjn_sc00049.1.g02800.1.am.mkhc:exon:14
Zjn_sc00049.1 maker exon 1123306 1123550 . - . ID=Zjn_sc00049.1.g02800.1.am.mkhc:exon:13
Zjn_sc00049.1 maker exon 1123662 1123980 . - . ID=Zjn_sc00049.1.g02800.1.am.mkhc:exon:12
Zjn_sc00049.1 maker exon 1124125 1124349 . - . ID=Zjn_sc00049.1.g02800.1.am.mkhc:exon:11
Zjn_sc00049.1 maker exon 1124433 1124599 . - . ID=Zjn_sc00049.1.g02800.1.am.mkhc:exon:10
Zjn_sc00049.1 maker exon 1124681 1124797 . - . ID=Zjn_sc00049.1.g02800.1.am.mkhc:exon:9
Zjn_sc00049.1 maker exon 1124878 1125051 . - . ID=Zjn_sc00049.1.g02800.1.am.mkhc:exon:8
Zjn_sc00049.1 maker exon 1125333 1125549 . - . ID=Zjn_sc00049.1.g02800.1.am.mkhc:exon:7
Zjn_sc00049.1 maker exon 1125633 1125751 . - . ID=Zjn_sc00049.1.g02800.1.am.mkhc:exon:6
Zjn_sc00049.1 maker exon 1125887 1126079 . - . ID=Zjn_sc00049.1.g02800.1.am.mkhc:exon:5
Zjn_sc00049.1 maker exon 1126171 1126322 . - . ID=Zjn_sc00049.1.g02800.1.am.mkhc:exon:4
Zjn_sc00049.1 maker exon 1126402 1126522 . - . ID=Zjn_sc00049.1.g02800.1.am.mkhc:exon:3
Zjn_sc00049.1 maker exon 1126957 1127070 . - . ID=Zjn_sc00049.1.g02800.1.am.mkhc:exon:2
Zjn_sc00049.1 maker exon 1128122 1129186 . - . ID=Zjn_sc00049.1.g02800.1.am.mkhc:exon:1

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