Z. japonica Nagirizaki
Zjn_sc00049.1.g00820.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G42620.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 587 411 587 7e-52 118.1 18.1 22.1
Subject 693 514 693
Annot | Symbols: MAX2, ORE9, PPS | RNI-like superfamily protein | chr2:17756170-17758251 FORWARD LENGTH=693
NR ref|XP_003564315.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 587 253 462 9e-87 120.8 29.6 31.7
Subject 709 205 415
Annot PREDICTED: F-box/LRR-repeat MAX2 homolog [Brachypodium distachyon]
IRGSP Os06t0154200-01_chr06_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 587 253 445 2e-85 122.7 26.4 28.8
Subject 720 215 407
Annot
Sbicolor Sobic.010G043000.1.p|Chr10|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 587 269 462 7e-86 119.3 27.1 29.6
Subject 700 215 409
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00049.1.g00820.1.am.mk length: 587 aa.
IPR006553 Leucine-rich repeat, cysteine-containing subtype
method AccNumber shortName E-value location
HMMSmart SM00367 Leucine-rich 0.00067 294-325
419-444
no_ID  
Gene3D G3DSA:3.80.10.10 no description 1.5e-13 286-551
HMMPanther PTHR23125 F-BOX/LEUCINE 8.9e-13 268-445
Seg seg seg NA 87-102
159-185
190-207
210-253
255-269
superfamily SSF52047 RNI-like 4e-11 280-552
Pseudomolecule
Chromosome Start End Strand
20311692314514+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00049.1 maker_non_over exon 311692 312064 . + . ID=Zjn_sc00049.1.g00820.1.am.mk:exon:1
Zjn_sc00049.1 maker_non_over exon 312151 312533 . + . ID=Zjn_sc00049.1.g00820.1.am.mk:exon:2
Zjn_sc00049.1 maker_non_over exon 312985 313564 . + . ID=Zjn_sc00049.1.g00820.1.am.mk:exon:3
Zjn_sc00049.1 maker_non_over exon 314087 314514 . + . ID=Zjn_sc00049.1.g00820.1.am.mk:exon:4

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