Z. japonica Nagirizaki
Zjn_sc00047.1.g03530.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G10380.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 338 24 338 e-109 89.9 62.7 68.6
Subject 304 29 304
Annot | Symbols: NIP5;1, NLM6, NLM8 | NOD26-like intrinsic protein 5;1 | chr4:6431530-6434510 REVERSE LENGTH=304
NR ref|XP_002464380.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 338 2 338 e-150 89.1 84.3 86.4
Subject 301 3 301
Annot hypothetical protein SORBIDRAFT_01g017230 [Sorghum bicolor] gi|241918234|gb|EER91378.1| hypothetical protein SORBIDRAFT_01g017230 [Sorghum bicolor]
IRGSP Os10t0513200-01_chr10_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 338 7 338 e-148 92 80.5 83.1
Subject 311 16 311
Annot
Sbicolor Sobic.001G195800.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 338 2 338 e-153 89.1 84.3 86.4
Subject 301 3 301
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00047.1.g03530.1.am.mk length: 338 aa.
IPR000425 Major intrinsic protein
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00783 MINTRINSICP 1.7e-40 105-124
144-168
181-200
227-245
263-285
300-320
HMMPanther PTHR19139 AQUAPORIN 2.6e-122 105-338
HMMPfam PF00230 MIP 1.2e-50 105-317
IPR022357 Major intrinsic protein, conserved site
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
PatternScan PS00221 MIP NA 162-170
IPR023271 Aquaporin-like
Gene3D G3DSA:1.20.1080.10 no description 3.9e-62 105-328
superfamily SSF81338 Aquaporin-like 2.7e-56 94-337
no_ID  
HMMPanther PTHR19139:SF22 NODULIN-26-RELATED 2.6e-122 105-338
Seg seg seg NA 11-23
238-249
309-320
Pseudomolecule
Chromosome Start End Strand
846336144636999-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00047.1 maker_non_over exon 1829762 1829957 . - . ID=Zjn_sc00047.1.g03530.1.am.mk:exon:5
Zjn_sc00047.1 maker_non_over exon 1830065 1830126 . - . ID=Zjn_sc00047.1.g03530.1.am.mk:exon:4
Zjn_sc00047.1 maker_non_over exon 1830203 1830643 . - . ID=Zjn_sc00047.1.g03530.1.am.mk:exon:3
Zjn_sc00047.1 maker_non_over exon 1831936 1832031 . - . ID=Zjn_sc00047.1.g03530.1.am.mk:exon:2
Zjn_sc00047.1 maker_non_over exon 1832926 1833147 . - . ID=Zjn_sc00047.1.g03530.1.am.mk:exon:1

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